Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734455.1_202014-07-28] 8,119 sequences; 36,391,227 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq7922 125 2e-23 seq5093 118 3e-21 seq3043 98.7 2e-15 >seq7922 Length=20657 Score = 125 bits (138), Expect = 2e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| || ||||||| ||||||||||| || || || || ||||| ||||| Sbjct 16087 TTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAA 16146 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||||| |||||||| || || || || || || ||||| || | ||| || || Sbjct 16147 GATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCTTGGATCTTGGATTTAACATT 16206 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | || || || || || | |||||| ||||| || |||| ||||||||| Sbjct 16207 GTCAATCGTGTCTGAAGACTCGACCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGAC 16266 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 16267 GAAGATCTGCAT 16278 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || ||||| || || | || || | ||| || || | || || || || ||| Sbjct 15860 TCCTTCTGAATATTGTAATCAGACAGGGTTCTTCCATCCTCCAGCTGCTTGCCCGCAAAG 15919 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| ||| ||||| | ||||| || || || || || || || | ||| ||||| Sbjct 15920 ATCAAACGTTGTTGGTCAGGCGGGATACCCTCCTTGTCTTGAATCTTTGATTTGACGTTG 15979 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || ||||| |||||||| ||||| || || ||||| || ||||||||| Sbjct 15980 TCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACG 16039 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 16040 AAGATTTGCAT 16050 >seq5093 Length=26073 Score = 118 bits (130), Expect = 3e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || ||||| || | ||||| || || ||||| || ||||||| Sbjct 13977 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 14036 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | ||||| || | || || || || ||||||| ||||| || ||| Sbjct 14037 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGG 14096 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || || || || || | |||||||| || || Sbjct 14097 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACC 14156 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 || || ||||| ||||| || || || ||||||||||| |||||||| || Sbjct 14157 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 14206 >seq3043 Length=31884 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || ||||||| ||| || || ||||| || || || || || || ||||| Sbjct 26049 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGATA 26108 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 ||||||||||| | || ||||| || || ||||| || || | ||||| || || Sbjct 26109 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 26168 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | || || || || || | ||||| ||||| || ||||||||||| ||||| Sbjct 26169 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 26227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179531686819682