Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734455.1_202014-07-28] 8,119 sequences; 36,391,227 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq7922 138 1e-27 seq559 118 1e-21 seq5093 111 2e-19 seq3043 105 7e-18 >seq7922 Length=20657 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | |||||||| |||||||| | || |||||| | | Sbjct 16278 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 16219 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | || || | ||||| || |||| ||||| ||||| ||||| | ||||| Sbjct 16218 GACACGATTGACAATG-TTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCA 16160 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | ||| || || ||| |||| || | ||||| || ||||||||| Sbjct 16159 ACAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAA 16100 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||||| | || ||||| ||||| |||||| || | || || Sbjct 16099 CATCCAAAAGGAATCTACTCTGCACTTGGTCCTGCGTCTGCGTGGTGG 16052 Score = 118 bits (130), Expect = 1e-21 Identities = 148/197 (75%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| |||| || ||| | | ||| | | | | || | |||| Sbjct 16484 TCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAATG--TAAA 16427 Query 38325 GAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGG 38383 | || |||| ||||| ||||| ||||| | |||||||| || || |||| ||| || Sbjct 16426 GTCGAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAACAACGCCTTATTTTCGCTGG 16367 Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGC 38442 || ||||| || |||| || ||||| ||||||||||||||||||||| ||| || | Sbjct 16366 AAAGCAGCTTGAGGACGGTCGGACCCTTTCCGACTACAACATCCAAAAGGAGAGC-ACCC 16308 Query 38443 TGCATTTGGTGCTGCGT 38459 | |||||||| || ||| Sbjct 16307 TCCATTTGGTCCTTCGT 16291 Score = 105 bits (116), Expect = 7e-18 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||||| || |||||||||||||| |||| || || | | Sbjct 16050 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 15991 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | | |||| | ||| ||| || | ||||| ||||| | ||||||| |||| Sbjct 15990 GACACAATCGACAACG-TCAAATCAAAGATTCAAGACAAGGAGGGTA-TCCCGCCTGACC 15933 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || | || | |||||||| |||||||| || | | ||||| || |||| Sbjct 15932 AACAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGAAGAACCCTGTCTGATTACA 15873 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | || || ||||| |||| ||||| | ||||| ||| | | ||||| Sbjct 15872 ATATTCAGAAGGAGTCGACTCTGCACCTTGTGCTCCGTCTTCGTGGCGG 15824 >seq559 Length=9703 Score = 118 bits (130), Expect = 1e-21 Identities = 199/285 (70%), Gaps = 5/285 (2%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 ||| |||||||| ||| ||| || | || ||||| | ||||||||| ||| || || Sbjct 2718 GTACGTGTCGATCAGGAGCGAGTAAGTCTCGGAGTGAATGTTCTCCATCATGATCTGGAA 2777 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCTCGACCAGAT 133285 |||||| ||||| || |||||| | ||| ||||| | || ||| ||||| || || | Sbjct 2778 GCCGTAGAAGCAACGGGCCTCGGGAATCTGGACTTCG-GCGCTGAATCGCTCAACGAGGT 2836 Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345 | |||||||||||||| || |||||||| || || || | ||| |||||| | Sbjct 2837 TCTCGTTGACGATGCCATCAGAAGCGGCGAAGAATGCAAGGATGTGTGAGATGAAGTACT 2896 Query 133346 GCTCGTTGTC---GTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402 || | || | | | | ||||||| | |||||||||| || | ||| | Sbjct 2897 TTTCATCATCTGTGAGCTTGTTGTTCCAGTCGTGGAGATCCTTGGACAAATCAATCTCTT 2956 Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACA 133447 || | ||||| || || |||||||| || |||||||| ||||| Sbjct 2957 CGGCCGTCCAGAATGAGGCCTCGGCCTTCTTGTACATCTGCCACA 3001 >seq5093 Length=26073 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| || |||||| | || || ||| | | | Sbjct 14203 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 14144 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || || |||| ||||| ||||| || ||| | ||||| Sbjct 14143 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 14084 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| | || | || ||||| ||||| || |||| | ||||| |||||||||| Sbjct 14083 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 14024 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| ||| || || || | ||||||||| || | || || Sbjct 14023 ATCCAGAAGGAGAGC-ACCCTCCACCTCGTGCTGCGTCTGCGTGGTGG 13977 >seq3043 Length=31884 Score = 105 bits (116), Expect = 7e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || || ||||| ||||||||| | || |||||| || | |||| | Sbjct 26227 TTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 26168 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || || | ||||| |||||||||||| | ||||||||||| || Sbjct 26167 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCTT 26108 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | || ||||| ||| |||| |||| || || ||| ||||||||||||||| ||| Sbjct 26107 ATCTTTGCTGGCAAGCAGTTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAAG 26048 Query 38433 G 38433 | Sbjct 26047 G 26047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500122038712960