Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734455.1_202014-07-28] 8,119 sequences; 36,391,227 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq7922 156 9e-33 >seq7922 Length=20657 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| ||||| ||||| || |||||||||||||| | || ||||| ||||| || Sbjct 15842 ACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCTTCCATCCTCC 15901 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| | ||||||||||| || || || || || ||||||||| Sbjct 15902 AGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACCCTCCTTGTCTTGA 15961 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || ||| |||||||| || || ||||| ||| ||| ||||| || || | || || Sbjct 15962 ATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTTG 16021 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | |||||| Sbjct 16022 CCGGTAAGCGTCTTGACGAAGATTTGCAT 16050 Score = 107 bits (118), Expect = 4e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || ||| ||| ||||| || ||||| |||| ||| || | || || || |||||| Sbjct 16304 TGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCAAGCTGC 16363 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || ||||| ||||| ||||||||||| |||||||| || || ||||| || || || Sbjct 16364 TTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTC 16423 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || || ||||| || | ||||| || ||||| | ||||| || || Sbjct 16424 GACTTTACATTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTTGCCAGT 16482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109366186523273