Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734455.1_202014-07-28] 8,119 sequences; 36,391,227 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq5093 114 8e-21 seq7922 104 2e-17 >seq5093 Length=26073 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | || ||| | ||| | || || |||||||| || || |||||||| |||| Sbjct 13975 CACCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGG 14034 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || || | |||| || | || || |||||||| ||||| |||||||| || | | Sbjct 14035 ACAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGG 14094 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||| || ||||| || || || | ||| ||| | ||||||||| || ||| Sbjct 14095 GGATACCCTCCTTGTCCTGGATCTTGGACTTGA-CATTGTCGATGGTGTCGCTCGACTCC 14153 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| ||||| || || || || | || || || ||||||||||| Sbjct 14154 ACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 14203 >seq7922 Length=20657 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||||| || ||||| || ||||| |||||||| ||||| Sbjct 16051 ACCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 16110 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || |||||| | || ||||| || ||||| || || |||| ||||| || || | || Sbjct 16111 CAGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGG 16170 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700 | ||| || ||||| || || ||| ||||| |||| ||||| || || | Sbjct 16171 AATACCCTCCTTGTCTTGGATCTTGGATTT-AACATTGTCAATCGTGTCTGAAGACTCGA 16229 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | |||||| || || || || || || || || ||||||||||| Sbjct 16230 CCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 16278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328671474636480