Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734455.1_202014-07-28] 8,119 sequences; 36,391,227 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq5093 105 7e-18 seq7922 91.5 1e-13 seq7092 89.7 5e-13 >seq5093 Length=26073 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||||||||| || ||| ||||| || |||||||||||| | ||| Sbjct 13986 AGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTG 14045 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || ||||| ||||| ||||| ||||| |||||||| || || || || || || Sbjct 14046 CCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCC 14105 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | |||||| ||| ||||| || || || Sbjct 14106 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTG 14165 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || | || || ||||| || ||||| Sbjct 14166 ATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 14203 >seq7922 Length=20657 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| || | ||| || || ||||||||||| |||||||||||| | ||| | Sbjct 16061 AGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGT 16120 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || | ||| || || || || |||| ||||| || || || || || || || Sbjct 16121 CCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCC 16180 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||| || || ||| || ||| | ||||| || || || || || | || Sbjct 16181 TTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTG 16240 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || ||||| || ||||| || ||||| Sbjct 16241 ATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 16278 >seq7092 Length=8190 Score = 89.7 bits (98), Expect = 5e-13 Identities = 278/422 (66%), Gaps = 9/422 (2%) Strand=Plus/Plus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 || |||||| | |||| || || || || || || || ||||||| | | | Sbjct 5159 CAGCACATGATCATGCGTGTTGCTGTAGGTATCTGGGGTGACAACATTGAGCGAGTCATC 5218 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 ||||| ||| | | |||||| ||| || || ||||| || || || | || | Sbjct 5219 GAAACCTACAACCTTATGTCTAGCAAATTCTTCACACACGCCTCCCCGACGCTTTTCAAC 5278 Query 7684 GCGGGCACAAACGC-GCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAG 7742 || |||||| ||| | |||| ||||| || || || || | ||| || ||||| Sbjct 5279 GCCGGCACAC-CGCAGGCTCAGTTGTCGTCATGCTTCCTGGTTGATATGAAGGACGACAG 5337 Query 7743 CATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATTTCCAAATACGGC-GGC 7800 ||| || || || ||| |||| || | || ||| |||| || ||||| | ||| ||| Sbjct 5338 CATTGAGGGAATCTACGACACCCT-CAAGACTTGTGCCATGATCTCCAAG-ATGGCTGGC 5395 Query 7801 GGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAAC 7860 || || ||||| ||||| | | | || |||| || | |||| |||||| Sbjct 5396 GGTATCGGTCTCAACGTCCATCGCATCCGTGCCACTGGCTCCTATATCGCCGGTACCAAC 5455 Query 7861 GGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTA 7920 || | | | ||| | | |||||| |||| |||||||| ||| | | || | || Sbjct 5456 GGCACCTCGAACGGCATTGTTCCCATGCTGCGTGTGTTCAACAACACAGCTCGCTACGTC 5515 Query 7921 GACCAGGGGGGAAA---GCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCG 7977 |||||||| || || |||| || ||| ||||||||| | |||||||||||||| Sbjct 5516 GACCAGGGTGGCAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCGTGGCACGCA 5575 Query 7978 GA 7979 || Sbjct 5576 GA 5577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505347108379880