Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734455.1_202014-07-28] 8,119 sequences; 36,391,227 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq7922 176 1e-38 seq5093 145 2e-29 seq3043 134 3e-26 >seq7922 Length=20657 Score = 176 bits (194), Expect = 1e-38 Identities = 172/222 (77%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || |||||||| ||||| ||||| || || || || ||||| | ||||| Sbjct 15829 ACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGT 15888 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 |||||||| |||||||||||||| || ||||| | |||||||||||||| || | || Sbjct 15889 TCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACC 15948 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| || |||||| ||| ||||| ||||| ||||| || |||||| ||||| Sbjct 15949 CTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAG 16008 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || || || ||||| || || | ||||| Sbjct 16009 TGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 16050 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| ||||| || || ||||||||||| || || | || || | |||||| Sbjct 16067 AGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGTCCATCC 16126 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| |||||| || |||||||| || || |||||||| ||||||| || |||||||| Sbjct 16127 TCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCT 16186 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||| || || || || ||||| || || ||||| | ||||| ||| Sbjct 16187 TGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTGATGGTC 16246 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| | |||||| || || | |||||| Sbjct 16247 TTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 16278 Score = 147 bits (162), Expect = 5e-30 Identities = 149/193 (77%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | || || ||| ||| ||||||||||| || || | |||||||| || || Sbjct 16295 AGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCC 16354 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || ||||| ||||||||||||||||| ||||||| || ||||||||| Sbjct 16355 TCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCC 16414 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTCGAGAGTGATC 211079 |||||||| || || || |||||||| || ||| || |||||||| ||||| Sbjct 16415 TGGATCTTCGACTTTACATTGTCGATGGTATCGCTAGA---CTCCACCTCGAGGGTGATG 16471 Query 211080 GTCTTTCCCGTGA 211092 ||||| || |||| Sbjct 16472 GTCTTGCCAGTGA 16484 >seq5093 Length=26073 Score = 145 bits (160), Expect = 2e-29 Identities = 162/215 (75%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || ||| ||| || |||||||| || || | |||||||| || || Sbjct 13992 AGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCCGTCC 14051 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| | ||| || ||||| || || | || ||||||||| Sbjct 14052 TCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCC 14111 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATC 211079 |||||||| || || || ||||||||||| ||| || ||||| || ||||| Sbjct 14112 TGGATCTTGGACTTGACATTGTCGATGGTGTC---GCTCGACTCCACCTCAAGGGTGATA 14168 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| |||||||| ||||| || || | |||||| Sbjct 14169 GTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 14203 >seq3043 Length=31884 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || | || || | || || |||| ||||||||| || |||||| Sbjct 26049 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGATA 26108 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || ||||||||||| |||| ||| ||||||||||| ||||| ||||| || ||| Sbjct 26109 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 26168 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| ||| || ||||| | ||||| ||||| || || |||||||| || || Sbjct 26169 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 26227 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159031419575435