Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734495.1_202014-07-28] 7,725 sequences; 36,288,354 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq5430 170 4e-37 seq2288 152 9e-32 seq4175 129 1e-24 seq977 127 4e-24 seq6987 89.7 9e-13 >seq5430 Length=16193 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| || || || || ||||||||||| || ||||| Sbjct 11355 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 11414 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || |||||||| || ||||| || |||| |||||||| || ||| Sbjct 11415 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 11474 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| | || || || || ||||||| || || || Sbjct 11475 ATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACC 11534 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || ||||| | ||||||||||| |||||||| Sbjct 11535 TCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 11581 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || || ||||| || || || || ||||| || Sbjct 11127 CCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGAC 11186 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || || ||||| || | |||||| || || || || | | ||||||||| || || Sbjct 11187 AGGGTTCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGG 11246 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||||| |||||| ||||| ||||||| ||||| ||| Sbjct 11247 ATACCCTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACT 11306 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||||| || || || ||||||||||| || ||||| Sbjct 11307 TCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 11353 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||||| || || ||| ||| ||||||||||| || ||||| Sbjct 11583 CCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 11642 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| || || || | |||||| || ||||| || || | ||||||||| || ||| Sbjct 11643 AGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGA 11702 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||| || |||||||| || | || || || Sbjct 11703 ATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACC 11762 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| || || || || |||||||| |||||||| |||||||| Sbjct 11763 TCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCAT 11809 >seq2288 Length=26173 Score = 152 bits (168), Expect = 9e-32 Identities = 174/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| || | ||| || ||| ||| || |||||||| || ||||| Sbjct 12093 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 12034 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || ||||| || || || | |||||| ||||| || || | | || ||||| || || Sbjct 12033 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGG 11974 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| || ||||| | |||||| ||||||||||| ||| || || || Sbjct 11973 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTC-GCTCGACTCCAC 11915 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 || | |||||| || || |||||||||||||||||||| |||||||| || Sbjct 11914 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 11864 >seq4175 Length=24231 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || |||||||| || | || || || |||||||| || || || || Sbjct 5814 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGATA 5755 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | |||||||| || ||||| || |||||||| |||||||| | ||| || ||| Sbjct 5754 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 5695 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| | || || || |||||||||||||| || || || || ||||| ||||| Sbjct 5694 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 5636 >seq977 Length=15290 Score = 127 bits (140), Expect = 4e-24 Identities = 662/1041 (64%), Gaps = 48/1041 (5%) Strand=Plus/Minus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | || || |||||| |||||| || || ||| |||||| Sbjct 11357 CGCCACTGGATGTACTCGGAAGGAGTGCTGTCCAAGTGGTTGTCGATGTGGGCGAAAGCG 11298 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| | ||| || || || ||||| |||| | | || ||| || Sbjct 11297 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCAGCAGTGGGG 11238 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 ||| || || ||||| |||||||| |||| ||| || ||||| ||||| ||||| Sbjct 11237 ATAAGCTCACCAGTCAGGACGTTGATGAGAGTAGACTTTCCGGCACCGTTGGGACCAATG 11178 Query 225161 ACGCCAATCCGGGATG--ACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGGGC 225218 ||| |||| ||||| | | ||| ||| || | | || ||||| || ||| Sbjct 11177 ACGGCAATACGGGAACCAAGAGAGCA--CTGGAAGGTGATGTCGCTGA-----TCTGGGG 11125 Query 225219 CAGTTTGGTAAGCAAAGGCCACGCCAC--GCAG--CTTCATGATGGCACGGT-------- 225266 | |||| || | ||| | || | || | || || |||||||| Sbjct 11124 C---TTGG--AGGTA---CCAGGGTACTGGAAGTCCATCTTGGTGGCACGGAGAATGGCC 11073 Query 225267 ----CCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACC 225322 |||||| | | |||||| ||||| |||||||||||||| ||| || | Sbjct 11072 TTGGCCTTGGTCTTGACACCCTCGAGGAAACCGGGCTCGGGGAAGGTGAACTCCATCTCA 11013 Query 225323 GCGTCCTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGG 225382 | | | || ||||||||||| ||| ||| | ||| ||||| | |||| Sbjct 11012 GAGGCACCGAGCTCGTAGTAAGACTTGGCCGAGGGGCACTTCTTGACGAACTCCTTCAGG 10953 Query 225383 TTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACAC 225441 || || ||| | ||||||||| || |||| ||||| || ||| | ||| || Sbjct 10952 TTACCACGGTAACGCTTGAGCTTGAAACGCT---CGTAGTGAACGATGTGCTG-GCAGAC 10897 Query 225442 TGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCT 225500 ||| ||||||| |||||||| ||||| |||||||| | || | | || | | Sbjct 10896 GTTGTCGAGGAAGCTGGAGTCGTGCGACACGATGATGGAGGTGCAAG---GGGAGTTC-T 10841 Query 225501 TGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCA 225560 ||||| | ||||| ||||| | ||||||| |||||| || || ||||| | Sbjct 10840 GGAGGTACTCCTCAAGCCACTTGACGTTCTTCACGTCCAAGTGGTTGGTGGGCTCGTCGA 10781 Query 225561 GAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGC 225620 | | ||| || |||| | | || || ||| || |||| ||||||||| ||||| | Sbjct 10780 GCAACAGAATATCAGGAGCCTCGAAGACGGCACGGCACAGAGCCAGCTTCATCTTCCAAC 10721 Query 225621 CCCCGGACAGGGAGCCGATTGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCCAGGA 225680 | ||||| || | | ||| | |||| | | | ||| || ||| |||| || Sbjct 10720 CACCGGAAAGAGCGGTGATCTCACCAGAAACCATGGAGTCGGTGAAACCGAACTCGTTGA 10661 Query 225681 GCGTCTGGATAATGCGCTCGGGAG-AGCTGCGAGC--GGCAACGTTGGGGTCGGACGAGA 225737 | || || | | |||| | | | | | || | ||| | | | | | | Sbjct 10660 GGCGCTTGACGACGTCCTCGCGGGTAACCGAGACCTTGGCCTCCTCCAGCTTCTTCATGG 10601 Query 225738 GGTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCG 225797 | || |||||| || | | ||| | ||||| |||||| || ||| | || | Sbjct 10600 TCCAGTCGATGGTGGTCATCTCAGTGTCAGCAGAGTCAAGGTCGTGCTCGACGAAGACGG 10541 Query 225798 TCCGGAGCT-GAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGC 225856 || || || | || | |||||| ||||| | ||| | || || || || | Sbjct 10540 TCTTGACCTCGCTCTGCTT-GGGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATG 10482 Query 225857 AGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATG 225916 ||||| ||| || | |||||||| ||| || |||||| | | || ||||||| Sbjct 10481 AGGGTGGACTTTCCGGAACCGTTGGGGCCGCAAAGACCGTAACGCTGGCCACGCTTGAGA 10422 Query 225917 TTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCG 225976 ||| | || ||| || || |||||| |||| ||||| || |||||| ||| | | Sbjct 10421 CGGAGATGGGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCGAGCGAGAACGTGCAGTTG 10362 Query 225977 CACAGGTCCTCACCCTCCTCG 225997 ||||||||||||||||||||| Sbjct 10361 CACAGGTCCTCACCCTCCTCG 10341 >seq6987 Length=5725 Score = 89.7 bits (98), Expect = 9e-13 Identities = 259/394 (66%), Gaps = 10/394 (3%) Strand=Plus/Plus Query 176892 ACAATTGGAGTCACGAAGCGCTTGAGGAACCCGGGGATCTCGAGCAGCGACGGGAACTGT 176951 |||| ||||| | ||| || || ||| ||||||||| ||||| || |||||||| Sbjct 3402 ACAACCGGAGTGATGAACTCCTGGAAGAAGTCGGGGATCTGCAGCAGAGAAGGGAACTGC 3461 Query 176952 GCATGGAAAAAGTTCAGCACTAGACCAGCAATATGTGAGCCGTCAACGTCCTGGTCTGCC 177011 | |||| ||||| | | ||||| ||||| ||||| ||||| || ||| Sbjct 3462 ACTTGGAGGAAGTTTATGAGAAGACCCTTGATATGACTTCCGTCGTGATCCTGATCAGCC 3521 Query 177012 ATAATAATCACAGACCCGTACCGAAGAGAGGACGCGTCCTTGTAGTTCACACCATTGCG- 177070 || || |||| | || || |||||| | ||| |||| | ||| ||| | Sbjct 3522 ATGATCATCAGATGACCATATCGAAGACCCTTGGTGTC--TGTA-TACACCTGTTTGTGT 3578 Query 177071 --GAGACCGAGAATTTGTTTGATGGCAGTAATCTCGGCGTTGTTAGTAATACTAGACACA 177128 |||||| || | |||||||| ||||| ||| || || | | Sbjct 3579 TTGAGACCCAGGAACTGTTTGATATTTTGGATCTCCTTGTTCTTCAGGATCTGATCTATG 3638 Query 177129 GACGCATCACGGACATTCAGTAGCTTACCACGGAGGGGGAAAATTCCGTAGCGATCCCGA 177188 || ||||| || |||||||| | |||||| | ||||||||| | ||| ||| || || Sbjct 3639 GATGCATCTCGCACATTCAGCATCTTACCCCTGAGGGGGAACACGCCGATGCGGTCTGGA 3698 Query 177189 CCCACGACAGCAAGGCCAGCTGTGGCAAGCGTGGCGGCAGAGTCACCCTCTGTCAAAATG 177248 ||| || ||| ||||||| || || ||||||||||||||| ||||| | Sbjct 3699 TCCAGGATGGCACGGCCAGCAACCGCCAGACCACGGGCAGAGTCACCCTCAGTCAACACT 3758 Query 177249 AGCGTGCACATTCCAGA--GTGCTTCGTGCCCGC 177280 ||||||||| || || |||||||||||| || Sbjct 3759 AGCGTGCAC--TCATGACCGTGCTTCGTGCCTGC 3790 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921533405837000