Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734515.1_202014-07-28]
7,603 sequences; 36,446,887 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq6663 127 2e-24
seq912 91.5 1e-13
seq2653 89.7 4e-13
>seq6663
Length=29693
Score = 127 bits (140), Expect = 2e-24
Identities = 154/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | ||||| || ||||| |||||||| ||| || ||||| ||||||
Sbjct 24879 ACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGTCCATCCTCC 24938
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
| ||| ||||||||| |||| || ||||| || || ||||| || ||||||||||||
Sbjct 24939 AACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCTTGG 24998
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || |||||| | || | ||||| | ||||||||| | || | || |||
Sbjct 24999 ATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAACGTGATGGTCTTG 25058
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| |||| ||| || || || |||||||||
Sbjct 25059 CCCGTCAAAGTCTTGACGAAGATCTGCATG 25088
Score = 109 bits (120), Expect = 5e-19
Identities = 150/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
||||| |||| || ||| ||||| |||||||| ||| | || || |||||
Sbjct 25107 ACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCA 25166
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| ||||||||| | || || || || || || ||||| || |||||||||||
Sbjct 25167 AGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGG 25226
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||| || | | ||||||||| | ||| | ||| |||
Sbjct 25227 ATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCTTG 25286
Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCATG 118739
|| || || ||||| || ||||||||||||
Sbjct 25287 CCAGTGAGGGTTTTGACGAAAATCTGCATG 25316
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||| | ||| | || ||||| || ||||| |||||||| || || | ||||||
Sbjct 24650 CACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCTTCCATCCTC 24709
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
||||| || || || |||| | ||| || || || || || || ||||||||||||
Sbjct 24710 CAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACCCTCCTTGTCTTG 24769
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| ||| ||| || | |||| ||||| | || || |||| || | |||||
Sbjct 24770 AATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTT 24829
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||||| || || || || || || |||||
Sbjct 24830 GCCGGTAAGCGTCTTGACGAAGATTTGCAT 24859
>seq912
Length=8807
Score = 91.5 bits (100), Expect = 1e-13
Identities = 337/523 (64%), Gaps = 29/523 (6%)
Strand=Plus/Minus
Query 44789 CCCTGCGTGCGCAGAAAGGCCGAATGGGCGATGAAGTATATTGACGATGAAAAGATAACT 44848
|||||| | |||| |||||||| ||||| ||| || || ||| | ||| |||
Sbjct 1701 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTCAACC 1642
Query 44849 TTGGCCGAACGATTGGTCGCATTCGCCATTGTCGAAGGAGTGTTCTTTTCGGGGAGTTTT 44908
|| ||| || || |||| ||||| | ||||| || | ||||| || ||||
Sbjct 1641 TTTGCCACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTT 1582
Query 44909 GCGGCGATATTTTACATGAAAACCAAGGGAGTGATGCCCGGACTGACGTTTAGCAACGAA 44968
|| | || || | | || | || ||||||| || ||||| || ||||||
Sbjct 1581 GCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAG 1522
Query 44969 TTGATTTCGAGAGACGAAGGTCTGCACACCAACTTTGCCTGCCTCTACTATAATACGAGA 45028
| || ||| | || || ||||| |||||| |||||||||| ||| || | | ||
Sbjct 1521 CTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTC--CTGTTCT-CGCTC 1465
Query 45029 GTCGATCAAAAGTTGGACGCGCCCACC---------GTCAACGACAT-GTTCTCCGAAGC 45078
| || ||| || ||||| | || || || || ||| || || ||
Sbjct 1464 CT-GAACAACAG--------GCCCAACAAGGAGGTTGTGAAGGAGATTGTTGTC-GATGC 1415
Query 45079 CGTGGCCATCGAGATGGAATTTTTTGCTGAGGCTCTGCCCGAATCGTTGGTGGGAATGAA 45138
|| || ||| || ||| || | ||||| ||||| | | |||| |||||
Sbjct 1414 TGTCAAGATTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAA 1355
Query 45139 CGCGAATATGATGAGAAAGTACATTGAGTTTGTCGCCGATCGTCTTCTCGTC---CAGTT 45195
||| || |||||| ||||||||||||||||||| || | ||||| ||| | |
Sbjct 1354 CGCCAACCTGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCCCTGGG 1295
Query 45196 AAAGTATCCCAAGATGTACTATACTGAGAACCCATTCGAGTTTATGAACAATATTTCGTT 45255
||| | ||| | ||| | | ||||||||||| |||||| | || || || |
Sbjct 1294 AAACGAG---AAGGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACT 1238
Query 45256 GGAGGGCAAAACTAAtttttttGAGAAACGCGTCGGCGAATAC 45298
| ||||| || || || || ||||||||||| ||||| |||
Sbjct 1237 CGGCGGCAAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTAC 1195
>seq2653
Length=12174
Score = 89.7 bits (98), Expect = 4e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||| | ||| || ||||| | ||| || ||||| ||||
Sbjct 5785 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGATA 5726
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCG 118670
|||||||| || || || || || ||||||||||| ||| || || || | |||
Sbjct 5725 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 5666
Query 118671 ACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 118729
| ||||||| | ||||||||| | ||| | || ||||| |||||||| || || ||
Sbjct 5665 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 5607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433790200597276
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |