Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734515.1_202014-07-28]
7,603 sequences; 36,446,887 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq6663 125 2e-23
seq700 118 3e-21
seq2653 98.7 2e-15
>seq6663
Length=29693
Score = 125 bits (138), Expect = 2e-23
Identities = 143/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||| |||||||| || ||||||| ||||||||||| || || || || ||||| |||||
Sbjct 24896 TTCCTTTTGGATGTTGTAGTCGGACAGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAA 24955
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
|||||| |||||||| || || || || || || ||||| || | ||| || ||
Sbjct 24956 GATCAGTCGCTGTTGGTCCGGAGGAATACCCTCCTTGTCTTGGATCTTGGATTTAACATT 25015
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| || | || || || || || | |||||| ||||| || |||| |||||||||
Sbjct 25016 GTCAATCGTGTCTGAAGACTCGACCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGAC 25075
Query 288462 GAATATCTGCAT 288473
||| ||||||||
Sbjct 25076 GAAGATCTGCAT 25087
Score = 114 bits (126), Expect = 3e-20
Identities = 151/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| ||||| | || ||||| || | || || || || ||||| || ||||
Sbjct 25313 CATG-CCACCACGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGT 25371
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| || || || ||||| || | ||| || || || || || |||||||||||
Sbjct 25372 CGGAAAGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCG 25431
Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421
||||| || || || |||||||| |||| || ||||| || || | |||||| || |
Sbjct 25432 GAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACT 25491
Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGT 288449
| || ||||| ||||| ||||| || ||
Sbjct 25492 CCACCTCGAGGGTGATGGTCTTGCCAGT 25519
Score = 93.3 bits (102), Expect = 1e-13
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || || ||||| || || | || || | ||| || || | || || || || |||
Sbjct 24669 TCCTTCTGAATATTGTAATCAGACAGGGTTCTTCCATCCTCCAGCTGCTTGCCCGCAAAG 24728
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|||| ||| ||||| | ||||| || || || || || || || | ||| |||||
Sbjct 24729 ATCAAACGTTGTTGGTCAGGCGGGATACCCTCCTTGTCTTGAATCTTTGATTTGACGTTG 24788
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || ||||| |||||||| ||||| || || ||||| || |||||||||
Sbjct 24789 TCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACG 24848
Query 288463 AATATCTGCAT 288473
|| || |||||
Sbjct 24849 AAGATTTGCAT 24859
>seq700
Length=26153
Score = 118 bits (130), Expect = 3e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || ||||| || | ||||| || || ||||| || |||||||
Sbjct 12103 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 12044
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || | ||||| || | || || || || ||||||| ||||| || |||
Sbjct 12043 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGG 11984
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| || | || || || || || | |||||||| || ||
Sbjct 11983 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACC 11924
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476
|| || ||||| ||||| || || || ||||||||||| |||||||| ||
Sbjct 11923 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 11874
>seq2653
Length=12174
Score = 98.7 bits (108), Expect = 2e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||||| ||| || || ||||| || || || || || || |||||
Sbjct 5785 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGATA 5726
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
||||||||||| | || ||||| || || ||||| || || | ||||| || ||
Sbjct 5725 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 5666
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | || || || || || | ||||| ||||| || ||||||||||| |||||
Sbjct 5665 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 5607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179539485809834
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |