Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734515.1_202014-07-28] 7,603 sequences; 36,446,887 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2947 102 1e-16 >seq2947 Length=26518 Score = 102 bits (112), Expect = 1e-16 Identities = 270/404 (67%), Gaps = 14/404 (3%) Strand=Plus/Minus Query 147106 ACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATG-GCGGGCAGGTCCGCGG 147163 ||||||||||| ||| | ||||||||||||||||| |||| || | |||||| || Sbjct 19974 ACGTAAAACTGCGCAAAC-ATGTGGCACGGCGGCAGGACCATAAGCTTG-AGGTCCTTGG 19917 Query 147164 GGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAA 147223 ||||||| || | |||| || | | | |||||| | | || | | Sbjct 19916 GGTTCCAAGCACTAAGAACCATGCGGCGGTCGTACGGGTTCGTGCGGAGCTTGTGCA--- 19860 Query 147224 CCCACCTC----AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTAC 147279 | ||||| |||||||| |||||||||||| ||||| || |||||| ||| Sbjct 19859 -CGACCTCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTAT 19801 Query 147280 CTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTG 147339 ||| |||||||| | ||| ||||||||||| || || ||||||||||| || | | Sbjct 19800 TCGGCGCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGG 19741 Query 147340 TGCGAGAAGCCC-GCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCAC 147398 ||| || ||| ||||| | || ||||| || |||| | |||||||||| || Sbjct 19740 TGCTGCAATCCCAGCCCG-TCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGAC 19682 Query 147399 TCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTC 147458 || | || || ||| | ||| | |||| | |||||| |||||||| Sbjct 19681 CCCGGCGTCGCTCAGGGGCTTCGCCGACGTCGCGCCCGACACGAACCACAGCAGCTCGAG 19622 Query 147459 CAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502 | || ||| | | ||||| | ||| || |||||||| |||| Sbjct 19621 GATCACGGCCCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGGGA 19578 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 146872 ATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACG 146931 |||| ||||| |||||| || | || | | ||||||| | || | || ||| Sbjct 20289 ATCTCGAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCGTCCGGAGTGCGTCGACG 20230 Query 146932 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCG 146991 |||| | ||||||||| || || |||| | |||| | ||| ||| || || Sbjct 20229 TGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCACTAGACCC 20170 Query 146992 GTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCC 147051 || | | || | ||||| || ||||| | ||||||||| ||||||||||| || || Sbjct 20169 GTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGGCACGCCT 20110 Query 147052 AGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 ||||||||||| | |||| |||||| |||||||| Sbjct 20109 AGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCA 20075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583432546759200