Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734525.1_202014-07-28] 9,213 sequences; 35,669,262 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq2879 107 2e-18 >seq2879 Length=6456 Score = 107 bits (118), Expect = 2e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 29748 CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGG 29807 |||||| ||| || ||| || || || ||||| | ||| ||||| ||| || | Sbjct 238 CCTGTTGATCTCGAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCGTCCGGAGTGC 179 Query 29808 TTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTC 29867 || ||||| || |||||||||||| || |||| | ||| | | || || | Sbjct 178 GTCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCAC 119 Query 29868 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29927 ||| || ||| | | || ||||||| ||| || || | ||||||||| ||||| ||||| Sbjct 118 TAGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGG 59 Query 29928 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969 || || || |||||||| | |||| |||||||||||| || Sbjct 58 CACGCCTAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCA 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408571719011249