Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734525.1_202014-07-28] 9,213 sequences; 35,669,262 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq5974 145 9e-29 seq8538 134 2e-25 seq6491 105 8e-17 seq3675 98.7 1e-14 seq1844 96.9 4e-14 seq4775 95.1 1e-13 seq1325 93.3 5e-13 >seq5974 Length=4960 Score = 145 bits (160), Expect = 9e-29 Identities = 187/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||||||||| || |||| ||| || || || |||||||| || | |||||| || Sbjct 2640 CTGGTCGACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGA 2699 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||||||| || || | |||| ||| | ||| || | || || | || Sbjct 2700 GGTGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCACGGATGCGATGGACGTTGAGACC 2759 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| ||||| ||| ||||||||| | || || ||||| ||||||||||| ||||| Sbjct 2760 GATACCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATTCCCTC 2819 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || |||| ||||||| || || || ||||| ||||| || | |||| ||||| Sbjct 2820 AATGCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCC 2879 Query 1630305 GGCGTTGAAGAGCGTGGG 1630322 ||||||||| ||||| || Sbjct 2880 GGCGTTGAAAAGCGTCGG 2897 Score = 98.7 bits (108), Expect = 1e-14 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 1628374 CCGTAGCACTCGTGCAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCG 1628433 |||||||| || ||||| || |||| ||| || | | | ||||||||| Sbjct 2413 CCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTT 2472 Query 1628434 GTCACCGCGCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCC 1628493 || | |||| ||| || || ||| |||| || ||| || ||||| || || Sbjct 2473 TTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCA 2532 Query 1628494 CGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGC 1628553 || |||||||||| ||||||||||| | |||||||| | |||| | || |||||| Sbjct 2533 CGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGC 2592 Query 1628554 CACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 |||||||| |||||| ||||||||| || ||||||| ||| || Sbjct 2593 CACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACC 2639 Score = 86.0 bits (94), Expect = 8e-11 Identities = 355/546 (65%), Gaps = 22/546 (4%) Strand=Plus/Plus Query 1626981 CTGGTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTG-GTGCGCAGATAGTACATGC 1627039 ||||||||| || ||||| || | | |||||| | |||| || ||||| |||||||||| Sbjct 1239 CTGGTCGACAGTGAACTGAATCGGCTGGGCGGCTG-CCTGCGTCCGCAGGTAGTACATGC 1297 Query 1627040 CGGTCTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGAT-GCGCTCGGGCGTC 1627098 |||||||||| || | ||| || | |||||||| ||||| || | | ||| Sbjct 1298 CGGTCTTGAGACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATG-GTC 1356 Query 1627099 GCGTCGGCGCA-GTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGC 1627157 | ||| ||||| || | ||||||||||||| |||||| | ||| | || || || Sbjct 1357 GGGTC-GCGCATGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGC 1415 Query 1627158 CGCCATGT---CGATGGTGACCCGGTTG-GGCACCTCCCACACGGTCTTGAAGATGGCCT 1627213 ||||| | ||| ||| || |||| | | |||||| || |||||| ||| || Sbjct 1416 GGCCATCTGAACGACGGT-AC---GTTGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCT 1471 Query 1627214 TGAGGTCGGGCGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACGA 1627273 || || | | | | | ||| | ||| | ||||| | | |||| || Sbjct 1472 TGGTATC------CTCAGGGATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGA 1525 Query 1627274 GCCTGTCGCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGGC 1627333 | || | |||| | |||||| || || | | ||| ||||| || | Sbjct 1526 TACGGTTCTTCATGTCGTCTGACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGG 1585 Query 1627334 GGTTGACCACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGA 1627393 ||||||| || || ||||| | ||||| ||||| ||| |||||| || | Sbjct 1586 GGTTGACTACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGG 1645 Query 1627394 CCTCGCACGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCA 1627453 ||| | |||| ||||||| ||||| || ||||| | || || |||||| | || | Sbjct 1646 GCTCAAAGCACTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAA 1705 Query 1627454 CGAGGAGCGAGTTGCGCAGGCCGTGCTG-TCGAACTAGCGCGCGCAGCGCGTCCCAGTCC 1627512 |||| | |||||| | || || || | || | | || || |||||||||||| Sbjct 1706 CGAGCAAGCTGTTGCGGACACCATGTTGCTTGATGTTG-GCCTTGAGAGCGTCCCAGTCC 1764 Query 1627513 CAGCGG 1627518 ||| || Sbjct 1765 CAGAGG 1770 >seq8538 Length=8794 Score = 134 bits (148), Expect = 2e-25 Identities = 217/311 (70%), Gaps = 1/311 (0%) Strand=Plus/Plus Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758 ||||||||| ||||| |||||| |||||||||||||| |||| ||||| |||||| Sbjct 1175 GTACTCGCCAACGCGTTTCTCGAAGAAGTTGGTCTTGCCGCCGAGTGAGATGTTCTCCAT 1234 Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818 | ||| ||||||| | |||| ||| ||| ||| || | | || || | Sbjct 1235 AAAATCGAATGGGTTGGTGGCACGGTAGACCTTCTCGTTTCCCAGGGCGACAAGAAGTCT 1294 Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878 ||| ||||||||||| |||||||| ||| ||| |||||||||||| | ||| || Sbjct 1295 GTCAGCGACAAACTCAATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAGGAGGGCGCA 1354 Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCT 868938 |||| || ||| | | |||||||| ||| |||| ||| || ||||| | |||| | | Sbjct 1355 GGGCAACGCCTCCGTAAGAAACTCTTGCTCAATCTTGACAGCATCGACAACAATCTCCTT 1414 Query 868939 GGGCACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCA 868998 || || |||| ||||| || | || | | || || |||||||||||| Sbjct 1415 CACAACCTCCTTGTTGGGCCTGTTGTTCAGGAGCGAGAACAGGAGACAGGCAAAGTCGGT 1474 Query 868999 GTGCA-ACCCT 869008 ||| | ||||| Sbjct 1475 GTGTAGACCCT 1485 Score = 95.1 bits (104), Expect = 1e-13 Identities = 117/158 (74%), Gaps = 9/158 (6%) Strand=Plus/Plus Query 869216 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAA 869275 || || ||||| ||||| |||||||||||||| ||||||| | ||| || ||| Sbjct 1518 AGACCAGGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAG 1577 Query 869276 AAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCC 869335 ||||| ||||||||| | || || |||| || ||| ||||||| || || || | Sbjct 1578 AAGATACCCTCGACGACAGCGAAAGCGATCAGGCGCGTGGCAAAG--GTTGA----CTTC 1631 Query 869336 TTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTT 869370 |||| |||||||| ||| |||||||||||||| || Sbjct 1632 TTGTCGGTGATCCACCTCAGAGCCCAGTCGGCCTTCTT 1669 >seq6491 Length=2372 Score = 105 bits (116), Expect = 8e-17 Identities = 266/402 (66%), Gaps = 8/402 (2%) Strand=Plus/Minus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCG-TCGGCTGCATCATCGACGGCGTGCC 18146 || ||||||| ||||||||| ||| | || || | || ||||| |||| || || Sbjct 1363 GTAACCACCTATGGCGAGTCACACTGC-CGCTCGGTGGGATGCATTGTCGATGGATGCCC 1305 Query 18147 GCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGG 18206 ||| |||||| | || ||||||||||||||||||| || || | || | ||||| || Sbjct 1304 GCCAGGCATGCAATTGACCGAGGCCGACATCCAGCCACACATGAACAGGAGGCGACCTGG 1245 Query 18207 CCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCAC 18266 ||| || | | ||||| ||||| ||| || ||| |||||||||||||| Sbjct 1244 ACAGTCCGATATCACAACGCCCCGCAATGAGGAGGACAAGGTCGAGATCCAGTCGGGCAC 1185 Query 18267 GGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCG 18326 ||| |||| ||||| | ||| | || | ||| | || ||| |||||| | Sbjct 1184 CGAGTTCGGCATCACGTTGGGCACCCCGATTGGCATGCGCGTCATGAACAAGGACCAGAG 1125 Query 18327 GCC------CGTCGACTATTCCGACATGTGCAAGGTGCCGCGGCCCTCACACGCCGACTA 18380 ||| | || | | ||| ||| || | | || || ||| ||||| || | Sbjct 1124 GCCAAAGGACTACGGCAACTCCACTATGGACAGGTTCCCCCGACCCAGCCACGCTGATTG 1065 Query 18381 CACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCG 18440 || ||| | | ||||||||| |||||||| ||||| ||| || ||||| Sbjct 1064 GACATACCTCGAGAAGTACGGCGTCAAGGCGAGCAGTGGCGGCGGCAGGAGCAGCGCCCG 1005 Query 18441 CGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 |||||| | || ||||| ||||| || |||||||||| Sbjct 1004 TGAGACCATTGGCCGAGTCGCAGCCGGTGCCATCGCCGAGAA 963 Score = 89.7 bits (98), Expect = 6e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || || ||||| | ||| ||||||| |||||| Sbjct 727 GACAGCATCGGAGGTACTGTTCACTGTGTCATCCGCAATGCGCCATCAGGCCTGGGCGAG 668 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| | |||||| ||| | || || |||||| || || ||||| Sbjct 667 CCTTGCTTCGACAAGTTGGAGGCCAAGCTGGGGCATGCTATGCTGAGCATTCCTGCCACA 608 Query 19167 AAGGGATTCGAGATTGG 19183 ||||| ||||||||||| Sbjct 607 AAGGGTTTCGAGATTGG 591 >seq3675 Length=29118 Score = 98.7 bits (108), Expect = 1e-14 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 1592191 CAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGAT 1592250 ||||||||| || || ||||| || || || |||| ||||| | || || || ||||| Sbjct 7433 CAACTACCTTGATATTAAGCCGCTACTTGACGTTGGTTGCAAAACGGTTGCAAATATGAT 7374 Query 1592251 CAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 |||||||||||| || |||||||| |||||||| || ||||||| Sbjct 7373 CAAGGGCAAGTCCCCAGAGGAGATTCGCAAGACTTTCAACATCA 7330 >seq1844 Length=8608 Score = 96.9 bits (106), Expect = 4e-14 Identities = 135/189 (71%), Gaps = 3/189 (2%) Strand=Plus/Minus Query 1726966 GTCGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGAC 1727025 ||||| ||||||||| || ||| |||||||| || || || || | |||||||||| Sbjct 6707 GTCGATATCGGGGTCGTTGATCAGACCCTTCCAGCCCACCGTGGTCCTGGGCTTTTCGAG 6648 Query 1727026 ATAGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAG 1727085 ||||||||||| || | ||| || | || || || ||| | | | ||| || Sbjct 6647 GTAGGCGCGCATAACGATGCAGAGGTCATCTGAGAGCTTGTC---GGCCAGGGCCTTGAG 6591 Query 1727086 GCGTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAAC 1727145 |||| ||| || |||| | | || ||||||||||| ||| || || ||||||||||| Sbjct 6590 GCGTTGGCAGTATTCGAGGGCCGCTGCCGGGTCGTGAATCGAGCAGGGTCCAACGATAAC 6531 Query 1727146 CAGCAGCCG 1727154 || || || Sbjct 6530 GAGAAGGCG 6522 >seq4775 Length=6252 Score = 95.1 bits (104), Expect = 1e-13 Identities = 101/131 (77%), Gaps = 2/131 (2%) Strand=Plus/Minus Query 1726698 CGGCGCGCACGGCGTCGAGTGCCGTCGCCACGC-TCCCGTCGGTGCCGTTCTTGAAGCCG 1726756 |||||| | ||||||| || || |||| | | |||||||||||||||||||||||| Sbjct 4554 CGGCGCCGATAGCGTCGA-TGGCGACGCCCAGTGTGCCGTCGGTGCCGTTCTTGAAGCCG 4496 Query 1726757 ATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCACCTGGCTCTCGGTCGTGCGCGCG 1726816 | || | || || | || |||| ||||||||| | |||||||||||| ||||| || Sbjct 4495 ACGGGGAACGATAGGCCAGAGGCCAGCTCGCGGTGAAGCTGGCTCTCGGTGGTGCGGGCA 4436 Query 1726817 CCCACGGCGCC 1726827 || || ||||| Sbjct 4435 CCGACTGCGCC 4425 >seq1325 Length=12132 Score = 93.3 bits (102), Expect = 5e-13 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 1574058 CTGCCGCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCG 1574117 || ||||| || || || ||| || | || || |||||||||||| || | || || | Sbjct 753 CTCCCGCCAGGCCGACATAAGCTGGTGATTCTTGACGAGGCCGACAGCATGACATCTGGC 694 Query 1574118 GCCCAGCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTG 1574177 || |||||||||||| || || ||||| | || ||||||| ||| | || || | Sbjct 693 GCACAGCAGGCCCTGAGGCGAACGATGGAGATCTACTCCAACACTACGAGATTCGCTTTC 634 Query 1574178 GCGTGCAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGC 1574237 ||||||||| ||| | |||| ||| |||| || ||| ||||| || || || Sbjct 633 GCGTGCAACCAGTCAAACAAAATCATAGAGCCCCTGCAGTCTCGATGCGCAATCCTCCGG 574 Query 1574238 TTTGTGCGCCTGGGTGACGCCCAG 1574261 | | ||||||| ||||||||| Sbjct 573 TACGCGCGCCTGACGGACGCCCAG 550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106383138075521