Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734525.1_202014-07-28]
9,213 sequences; 35,669,262 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq2879 127 2e-24
>seq2879
Length=6456
Score = 127 bits (140), Expect = 2e-24
Identities = 157/213 (74%), Gaps = 4/213 (2%)
Strand=Plus/Plus
Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695
|||||||||||| || || || | |||||||| |||| ||||| ||||||||||| ||
Sbjct 16 CTGCCAGCTCTACCAGCGGTCCTGCGACATGGGCCTAGGCGTGCCCTTCAACATTGCCAG 75
Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755
||||| ||||| ||| ||||||| || | || | ||| | || || ||| ||||
Sbjct 76 CTACGCACTGCTGACGCACATGATTGCGCGTGCCACGGGTCTAGTGCCCGGGTCGCTGAC 135
Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813
|| |||| |||| ||||| || ||||| ||||| |||| ||||||| |||
Sbjct 136 GC--ACGTCATGGGCGATGCTCACGTCTACGCCGACCACGTCGACGCACTCCGGACGCAG 193
Query 34814 CTGCAACGAGAGCCCCGACCGTTCCCCCAGCTC 34846
||| | || ||||| | ||||||||| |||||
Sbjct 194 CTGGAGCGCGAGCCGAGGCCGTTCCCCGAGCTC 226
Score = 127 bits (140), Expect = 2e-24
Identities = 157/213 (74%), Gaps = 4/213 (2%)
Strand=Plus/Minus
Query 6499 GAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTT 6558
||||| ||||||||| | ||||| || | |||||| ||||||| |||| |||||
Sbjct 226 GAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCGTCCGGAGTGCGTCGACGTGGTC 167
Query 6559 CAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCCCACG 6616
||||| || ||||| |||| |||| || |||| ||| || || | ||| |
Sbjct 166 GGCGTAGACGTGAGCATCGCCCATGACGT--GCGTCAGCGACCCGGGCACTAGACCCGTG 109
Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676
|| | || ||||||| ||| ||||| ||||| || ||||||||||| ||||| ||||
Sbjct 108 GCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGGCACGCCTAGG 49
Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709
|||||||| | || || || ||||||||||||
Sbjct 48 CCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 16
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448210776981360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |