Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734525.1_202014-07-28] 9,213 sequences; 35,669,262 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq4043 179 9e-40 seq323 122 2e-22 seq665 114 3e-20 >seq4043 Length=13738 Score = 179 bits (198), Expect = 9e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| | ||| ||||| ||||| ||||||| ||||| |||| || || Sbjct 10760 ACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGT 10701 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || | |||||| ||||||||||| ||||| |||||||| || |||||||| Sbjct 10700 GCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACC 10641 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| || ||| || || |||||||| | || || || || Sbjct 10640 CTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAA 10581 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| ||||||||||||||||| || | ||| | ||||| Sbjct 10580 CGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 10539 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| ||||| || || || || | ||||||||| | || || Sbjct 10988 ACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGT 10929 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||| ||||| || |||||||| || || ||||| | ||||||||||| ||||| ||||| Sbjct 10928 TCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACC 10869 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| |||||| || || ||||| |||||||| | ||| || || | Sbjct 10868 CTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAG 10809 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||| || | || || | ||| | |||||| Sbjct 10808 TGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 10767 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||||| ||| || ||||||| ||||| |||| | || | || || Sbjct 10522 AGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCC 10463 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| |||||||| ||||| ||||||||||| || |||||||| |||||||| Sbjct 10462 TCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCC 10403 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| |||||||| || |||| || || || || || |||||| Sbjct 10402 TGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTC 10343 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||||| | ||| | ||||| Sbjct 10342 TTGCCAGTGAGGGTTTTGACGAAAATCTGCAT 10311 Score = 96.9 bits (106), Expect = 8e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||||||||| || || |||| ||||| |||| | || | || || Sbjct 10294 AGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCC 10235 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || || || ||||| || |||||||| || || ||||| |||||||| Sbjct 10234 TCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCC 10175 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || |||||||| || | ||||| || | ||||| ||| Sbjct 10174 TGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTC 10115 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 10114 TTGCCAGT 10107 >seq323 Length=26040 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || |||||||| ||| || || |||| ||||| |||| || || Sbjct 14015 ACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGT 14074 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || || || |||||||| || || ||||| | || || ||||| || || ||||| Sbjct 14075 CCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACC 14134 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||||||||| | ||||| || | Sbjct 14135 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAG 14194 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||||||||| | || || | ||| | ||||| Sbjct 14195 GGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 14236 >seq665 Length=3538 Score = 114 bits (126), Expect = 3e-20 Identities = 194/276 (70%), Gaps = 9/276 (3%) Strand=Plus/Plus Query 7446 ATATTTAATATTTGGTGGCTTTTCTGGTATTAT-AGGTACTATATTTTCTATGATTATAA 7504 |||||||||||||| | ||||| || ||||| ||||||| ||||| | | |||| Sbjct 1437 ATATTTAATATTTGCTCTATTTTCCGG-ATTATTAGGTACTGCGTTTTCAGTACTGATAA 1495 Query 7505 GGTTAGAATTAGCTGCTCC--GGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAA 7562 | | || || || || |||| | ||||| || || ||| ||| | || || Sbjct 1496 GAATGGAGCTAAGTGGACCAGGGGTAC---AATATATAGCGG--ATAATCAATTATATAA 1550 Query 7563 CGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGAT 7622 ||| || || || || || | | |||||||| || | |||||||| | | | || Sbjct 1551 TAGTATAATAACAGCTCACGCTATATTAATGATTTTTTTCATGGTTATGCCAGCTTTAAT 1610 Query 7623 AGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCC 7682 ||| ||||| || |||| || | ||||||||||| || | ||||||||||| || || Sbjct 1611 AGGTGGTTTTGGTAATTTCTTAATGCCTTTAATGATAGGAGGGCCTGATATGGCATTCCC 1670 Query 7683 AAGGCTTAACAATATAAGTTTTTGATTACTACCGCC 7718 || || || ||||| |||||||||||| |||| || Sbjct 1671 TAGACTAAATAATATTAGTTTTTGATTATTACCACC 1706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192390431753822