Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734555.1_202014-07-28] 9,452 sequences; 35,613,849 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq4165 170 2e-37 seq1094 131 2e-25 seq8674 122 9e-23 seq3379 96.9 4e-15 >seq4165 Length=8793 Score = 170 bits (188), Expect = 2e-37 Identities = 278/395 (70%), Gaps = 4/395 (1%) Strand=Plus/Minus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| ||| | |||||| ||| || || | |||| | | ||||| Sbjct 1676 AGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTCAACCTTTGCCACGCGCC 1617 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 || | || ||||| | ||||||||| ||||||| || ||| ||| |||| || | Sbjct 1616 TGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCCATCTTCT 1557 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || ||||| ||||| || ||||||||| ||||||||||||||| | | Sbjct 1556 GGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCGCGTG 1497 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 | |||||||| || ||||||||||||| | |||||| || || | | || | Sbjct 1496 ATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCTGAACAACAGGCCCA 1437 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 | || | || | |||||| || ||| || ||| || ||||| || || | Sbjct 1436 ACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAGATTGAGCAAGAGTTTCTTA 1377 Query 117282 CCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACAT 117339 | || ||| |||| |||| || ||||| | || || || | |||| ||| ||||| Sbjct 1376 CGGAGGCGTTGCC-CTGCGCCCTCCTGGGCATGAA-CGCCAACCTGATGAAGCAGTACAT 1319 Query 117340 CGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGG 117374 ||||| ||||| ||||| || || ||| |||| Sbjct 1318 TGAGTTTGTCGCTGACAGACTTCTTGTCGCCCTGG 1284 Score = 149 bits (164), Expect = 6e-31 Identities = 208/286 (73%), Gaps = 7/286 (2%) Strand=Plus/Minus Query 116637 TGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGT 116696 |||||| |||||||| ||||||||||| || |||||||| | ||| ||| | || ||| Sbjct 2092 TGTGGCAGATGTACAAGAAGGCCGAGGCCTCATTCTGGACGGCCGAAGAGATTGATTTGT 2033 Query 116697 CCAAGGA-CACGAGCGACTGGGAGCGCTTGAAC---GACAACGAGCGCCATTTCATCAAG 116752 ||||||| | | | ||||||| | | | | || | || | |||||| Sbjct 2032 CCAAGGATCTCCA-CGACTGGAACAACAAGCTCACAGATGATGAAAAGTACTTCATCTCA 1974 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | || || || |||||||| || ||||||||||||||||| || || ||||| Sbjct 1973 CACATCCTTGCATTCTTCGCCGCTTCTGATGGCATCGTCAACGAGAACCTCGTTGAGCGA 1914 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| || | | || | ||| | ||||||| || |||||||||||||| |||||| || Sbjct 1913 TTCAGCGCCGAAG-TCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGAT 1855 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 ||||||| | ||||| || | || ||| ||| |||||||||||| Sbjct 1854 GGAGAACATTCACTCCGAGACTTACTCGCTCCTGATCGACACGTAC 1809 >seq1094 Length=12709 Score = 131 bits (144), Expect = 2e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| || |||||| | || || || | | | Sbjct 1013 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 954 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| ||||| |||||| |||||||| Sbjct 953 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 894 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| || ||||| ||||| || |||| | ||||| |||||||||| Sbjct 893 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 834 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 |||||||||||| ||| || || || ||| |||| Sbjct 833 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCG 799 >seq8674 Length=13684 Score = 122 bits (134), Expect = 9e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || ||||| || |||||||||||||| |||| || ||| | | Sbjct 10771 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 10830 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||| ||| |||| ||||| ||||| ||||| | ||||| Sbjct 10831 GACACAATCGACAACG-TCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCA 10889 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| | |||| |||||||| |||||||| || | | ||||| || ||||| Sbjct 10890 ACAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGAAGAACCCTGTCTGATTACAA 10949 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || ||||||||| | || ||||| || ||| Sbjct 10950 TATTCAGAAGGAGTCGACTCTGCACCTTGTG 10980 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| ||||| ||||| || || ||| | || ||||| || || Sbjct 10315 ATGCAGATTTTCGTCAAAACCCTCACTGGCAAGACGATTACCTTGGAGGTCGAGTCCTCC 10374 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | | ||| || || | ||||| ||||| || || ||||||| Sbjct 10375 GATACCATCGACAATGTAAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAA 10434 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || || | ||| || || ||||| || |||| || ||||| |||||||||| Sbjct 10435 CAACGCCTTATTTTCGCTGGAAAGCAGCTTGAGGACGGTCGGACCCTTTCCGACTACAAC 10494 Query 40870 ATCCAGAAGGAGGCCACGCTGCAT 40893 ||||| |||||| ||| || ||| Sbjct 10495 ATCCAAAAGGAGAGCACCCTCCAT 10518 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| ||||||||| |||| || || | | ||| | | | | |||| ||||| Sbjct 10109 TCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAACG-TCAAG 10167 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | ||||| ||||| ||||| ||||||| || || || || | || ||| Sbjct 10168 TCGAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTTATTTTTGCCGGC 10227 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || || || || |||| || || || |||||||||||||||||||||| || || Sbjct 10228 AAGCAACTCGAGGACGGTCGGACACTTTCCGACTACAACATCCAGAAGGAGAGTACTCTC 10287 Query 40891 CATCTAGTGTTGCGC 40905 || || ||| | ||| Sbjct 10288 CACCTCGTGCTCCGC 10302 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | |||||||| |||||||| | || ||||| | | Sbjct 10543 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 10602 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || || | | || || | | | ||||| ||||| || || ||||||| Sbjct 10603 GACACGATTGACAATGTTAAATCCAAGA-TCCAAGACAAGGAGGGTATTCCTCCGGACCA 10661 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||||| |||| ||| || || ||| |||| || | ||||| || ||||||||| Sbjct 10662 ACAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAA 10721 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 |||||| ||||| | || ||||| Sbjct 10722 CATCCAAAAGGAATCTACTCTGCA 10745 >seq3379 Length=24259 Score = 96.9 bits (106), Expect = 4e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || | || ||||| ||||||||| | || ||||| || | |||| | Sbjct 5659 TTCGTGAAGACTTTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 5718 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | | ||| || |||| ||||| ||||| || ||| | ||||| || || || Sbjct 5719 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCTT 5778 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| || ||||| ||| |||| |||| || || ||| ||||||||||||||||||| Sbjct 5779 ATCTTTGCTGGCAAGCAGTTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAAG 5838 Query 40879 G 40879 | Sbjct 5839 G 5839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515158326851520