Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734555.1_202014-07-28] 9,452 sequences; 35,613,849 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq8674 111 2e-19 seq1094 100 3e-16 >seq8674 Length=13684 Score = 111 bits (122), Expect = 2e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | || ||||| | | | ||||||||| |||||||||||| Sbjct 10542 GCCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGA 10483 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || |||||| || || || || | | || || || |||||||||||||| Sbjct 10482 AAGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGG 10423 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 ||||| || ||||| ||| || |||| ||||| | | ||| |||| ||||| | Sbjct 10422 AATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGT-CGATGGTATCGGAGGACTCGA 10364 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||| | || | ||| || ||||| || ||||| || |||||||||||| Sbjct 10363 CCTCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCATG 10314 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| ||||| || || || | | || |||||||| |||||||||||| | Sbjct 10769 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 10710 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||| | || || || | |||| || ||||||||||||||||| Sbjct 10709 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 10650 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| || ||||| ||| || ||| | |||| || | ||||| | ||||| || Sbjct 10649 ATACCCTCCTTGTCTTGGATCTTGGATTTAACATTG-TCAATCGTGTCTGAAGACTCGAC 10591 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | ||| | || || || |||| ||| || || || ||||||||| Sbjct 10590 CTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 10542 Score = 100 bits (110), Expect = 3e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||| | || || |||||||||||| || |||| | | Sbjct 10278 CTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAA 10219 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 || |||||||||||||||||||| ||||| || ||||| ||| || || | | Sbjct 10218 AATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTT 10159 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGT 138590 || | ||| ||| | ||||||||||||| || | || || ||||| Sbjct 10158 GTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTTGCCAGT 10111 >seq1094 Length=12709 Score = 100 bits (110), Expect = 3e-16 Identities = 140/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| || |||||||||||| || || | |||||| || || || |||| | | Sbjct 822 CTCCTTCTGGATGTTGTAGTCGGACAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAA 881 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATT 138541 ||| | ||||| |||||||| || ||||| || ||||| ||| || || | ||| Sbjct 882 GATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATT 941 Query 138542 GTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || | ||||||| ||||||||||||| | || | || || || || || || || | Sbjct 942 G-TCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGA 1000 Query 138602 CAAAAATCTGCATG 138615 | || ||||||||| Sbjct 1001 CGAAGATCTGCATG 1014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496203766597440