Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734555.1_202014-07-28] 9,452 sequences; 35,613,849 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq8674 132 1e-25 seq1094 114 3e-20 seq3379 102 2e-16 >seq8674 Length=13684 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| | ||| ||||| || |||||||||| ||||||||| | || || Sbjct 10763 CGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGTG 10704 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||| |||| ||||||||| |||||||| || ||||| ||||||||| ||| || Sbjct 10703 CGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACCC 10644 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| || || || | ||||||| | || || |||||| Sbjct 10643 TCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAAC 10584 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||| | ||| || || || || || Sbjct 10583 GTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTG 10546 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || |||||||| |||||||||||||| || | ||||| |||| || || Sbjct 10991 CGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGTT 10932 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 |||||||| ||||||||||| || || ||||| | ||| || ||||| || || || Sbjct 10931 CTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACCC 10872 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || ||||||||| || ||| |||| ||||||| | ||| || || | Sbjct 10871 TCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAGT 10812 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || || || || || || ||||| Sbjct 10811 GTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTG 10774 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||||| || ||||||||||| ||||||||| | | |||| || || Sbjct 10526 AGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCC 10467 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| ||||| || || || || ||||||||| ||| || || ||| Sbjct 10466 TCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCC 10407 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || |||| ||| || | | || || ||||| || |||||| Sbjct 10406 TGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTC 10347 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| ||||| || ||||| || Sbjct 10346 TTGCCAGTGAGGGTTTTGACGAAAATCTG 10318 Score = 95.1 bits (104), Expect = 3e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||||||||| |||||| |||| ||||||||| | | |||| || || Sbjct 10298 AGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCC 10239 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| ||||| || || |||||||| ||||||||| || || || ||| Sbjct 10238 TCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCC 10179 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| |||| ||| || | | || || || | ||||| ||| Sbjct 10178 TGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTC 10119 Query 199598 TTACCCGTGA 199607 || || |||| Sbjct 10118 TTGCCAGTGA 10109 >seq1094 Length=12709 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || |||||||| || |||||| |||| ||||||||| | || ||| Sbjct 793 CGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTC 852 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || || || || |||||||| ||||| ||||| | |||||||||||||| || || Sbjct 853 CTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCC 912 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| || |||| |||||| | | || || || | Sbjct 913 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGG 972 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| |||||||| || || || || || || Sbjct 973 GTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTG 1010 >seq3379 Length=24259 Score = 102 bits (112), Expect = 2e-16 Identities = 131/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 |||| |||| ||||||||| | | ||| | || || |||| |||||| || || |||| Sbjct 5839 CCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGA 5780 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559 | |||||||| ||||| || |||||| || ||||||||||| |||||| | Sbjct 5779 TAAGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGT 5720 Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619 ||| ||||| | | || || ||||| ||||| ||||| || || | ||| ||||| | Sbjct 5719 CGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAAAGTCTTCACGA 5660 Query 199620 A 199620 | Sbjct 5659 A 5659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178778828173284