Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734555.1_202014-07-28] 9,452 sequences; 35,613,849 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq8674 95.1 9e-15 >seq8674 Length=13684 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||| || ||||| || ||||| || ||||| | || ||||| | || Sbjct 10315 ATGCAGATTTTCGTCAAAACCCTCACTGGCAAGACGATTACCTTGGAGGTCGAGTCCTCC 10374 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || ||||| || || || || ||||| || ||| |||| ||| | Sbjct 10375 GATACCATCGACAAT--GTAAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCGGACC 10432 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| | ||||| || ||||| || | || |||| || | | | ||||| |||| Sbjct 10433 AACAACGCCTTATTTTCGCTGGAAAGCAGCTTGAGGACGGTCGGACCCTTTCCGACTACA 10492 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGC 28017 |||||||||| |||||||| | |||||||| | ||| | ||||| ||| Sbjct 10493 ACATCCAAAAGGAGAGCACCCTCCATTTGGTCCTTCGTCTCCGTGGTGGC 10542 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || ||| |||| ||| || || || | || || || ||||| || ||||| Sbjct 10636 GACAAGGAGGGTATTCCTCCGGACCAACAGCGACTGATCTTCGCTGGAAAGCAGTTGGAG 10695 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | ||||| ||||||| |||||||||||||| || ||| |||| ||||| || Sbjct 10696 GATGGACGCACGCTGTCCGACTACAACATCCAAAAGGAATCTACTCTGCACTTGGTCCTG 10755 Query 28003 CGTTTGCGTGGCGG 28016 ||| ||||||| || Sbjct 10756 CGTCTGCGTGGTGG 10769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355821405986004