Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734555.1_202014-07-28] 9,452 sequences; 35,613,849 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq7194 107 1e-18 seq7195 91.5 1e-13 >seq7194 Length=1304 Score = 107 bits (118), Expect = 1e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 27087 CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGG 27146 |||||| ||| || ||| || || || ||||| | ||| ||||| ||| || | Sbjct 1073 CCTGTTGATCTCGAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCGTCCGGAGTGC 1132 Query 27147 TTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTC 27206 || ||||| || |||||||||||| || |||| | ||| | | || || | Sbjct 1133 GTCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCAC 1192 Query 27207 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 27266 ||| || ||| | | || ||||||| ||| || || | ||||||||| ||||| ||||| Sbjct 1193 TAGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGG 1252 Query 27267 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308 || || || |||||||| | |||| |||||||||||| || Sbjct 1253 CACGCCTAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCA 1294 >seq7195 Length=1004 Score = 91.5 bits (100), Expect = 1e-13 Identities = 185/271 (68%), Gaps = 4/271 (1%) Strand=Plus/Plus Query 27454 AGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAA 27513 ||||| || || ||| |||| ||||||| | ||| ||||| || || || || Sbjct 36 AGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCGGCGCCAAAG 95 Query 27514 TGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCC 27573 || | ||||||||| ||||| || || |||||||| ||| | || | ||||| || ||| Sbjct 96 TGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGCTGCAATCCC 155 Query 27574 CTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTTCTCGG 27631 | ||||| || || | | |||||| ||||||||||||| ||||| | || | Sbjct 156 AGCCCGTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACCCCGGCGTCGCTC 215 Query 27632 AGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCT 27691 || | ||| | | || | || ||||||||||||||||| | |||||| Sbjct 216 AG-GGGCTTCGCCG-ACGTCGCGCCCGACACGAACCACAGCAGCTCGAGGATCACGGCCC 273 Query 27692 TCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 | | ||||| | ||| ||||| || || || Sbjct 274 GCGAGAAGACGCGCTTCGTCGTCAGCAGAGG 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369464634156212