Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734575.1_202014-07-28] 7,624 sequences; 35,571,426 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq4206 179 9e-40 seq58 122 2e-22 seq4 114 3e-20 >seq4206 Length=35864 Score = 179 bits (198), Expect = 9e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| | ||| ||||| ||||| ||||||| ||||| |||| || || Sbjct 25041 ACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGT 25100 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || | |||||| ||||||||||| ||||| |||||||| || |||||||| Sbjct 25101 GCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACC 25160 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| || ||| || || |||||||| | || || || || Sbjct 25161 CTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAA 25220 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| ||||||||||||||||| || | ||| | ||||| Sbjct 25221 CGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 25262 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| ||||| || || || || | ||||||||| | || || Sbjct 24813 ACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGT 24872 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||| ||||| || |||||||| || || ||||| | ||||||||||| ||||| ||||| Sbjct 24873 TCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACC 24932 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| |||||| || || ||||| |||||||| | ||| || || | Sbjct 24933 CTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAG 24992 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||| || | || || | ||| | |||||| Sbjct 24993 TGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 25034 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||||| ||| || ||||||| ||||| |||| | || | || || Sbjct 25279 AGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCC 25338 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| |||||||| ||||| ||||||||||| || |||||||| |||||||| Sbjct 25339 TCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCC 25398 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| |||||||| || |||| || || || || || |||||| Sbjct 25399 TGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTC 25458 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||||| | ||| | ||||| Sbjct 25459 TTGCCAGTGAGGGTTTTGACGAAAATCTGCAT 25490 Score = 96.9 bits (106), Expect = 8e-15 Identities = 134/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||||||||| || || |||| ||||| |||| | || | || || Sbjct 25507 AGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCC 25566 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || || || ||||| || |||||||| || || ||||| |||||||| Sbjct 25567 TCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTCC 25626 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || |||||||| || | ||||| || | ||||| ||| Sbjct 25627 TGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTC 25686 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 25687 TTGCCAGT 25694 >seq58 Length=26095 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || |||||||| ||| || || |||| ||||| |||| || || Sbjct 12089 ACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGT 12030 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || || || |||||||| || || ||||| | || || ||||| || || ||||| Sbjct 12029 CCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACC 11970 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||||||||| | ||||| || | Sbjct 11969 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAG 11910 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||||||||| | || || | ||| | ||||| Sbjct 11909 GGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 11868 >seq4 Length=3530 Score = 114 bits (126), Expect = 3e-20 Identities = 194/276 (70%), Gaps = 9/276 (3%) Strand=Plus/Minus Query 7446 ATATTTAATATTTGGTGGCTTTTCTGGTATTAT-AGGTACTATATTTTCTATGATTATAA 7504 |||||||||||||| | ||||| || ||||| ||||||| ||||| | | |||| Sbjct 2098 ATATTTAATATTTGCTCTATTTTCCGG-ATTATTAGGTACTGCGTTTTCAGTACTGATAA 2040 Query 7505 GGTTAGAATTAGCTGCTCC--GGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAA 7562 | | || || || || |||| | ||||| || || ||| ||| | || || Sbjct 2039 GAATGGAGCTAAGTGGACCAGGGGTAC---AATATATAGCGG--ATAATCAATTATATAA 1985 Query 7563 CGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGAT 7622 ||| || || || || || | | |||||||| || | |||||||| | | | || Sbjct 1984 TAGTATAATAACAGCTCACGCTATATTAATGATTTTTTTCATGGTTATGCCAGCTTTAAT 1925 Query 7623 AGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCC 7682 ||| ||||| || |||| || | ||||||||||| || | ||||||||||| || || Sbjct 1924 AGGTGGTTTTGGTAATTTCTTAATGCCTTTAATGATAGGAGGGCCTGATATGGCATTCCC 1865 Query 7683 AAGGCTTAACAATATAAGTTTTTGATTACTACCGCC 7718 || || || ||||| |||||||||||| |||| || Sbjct 1864 TAGACTAAATAATATTAGTTTTTGATTATTACCACC 1829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192414710571056