Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734575.1_202014-07-28] 7,624 sequences; 35,571,426 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq3086 96.9 5e-15 >seq3086 Length=8352 Score = 96.9 bits (106), Expect = 5e-15 Identities = 174/254 (69%), Gaps = 3/254 (1%) Strand=Plus/Plus Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986 || || |||||||| || || ||||| || ||||| || || | || || | |||| Sbjct 1409 TCGGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGAATC 1468 Query 46987 TGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046 || || || | | ||||| ||| | ||||| || || || |||||| ||| || Sbjct 1469 TGGACTTCGGCGCTGAATCGCTCAACGAGGTTCTCGTTGACGATGCCATCAGAAGCGGCG 1528 Query 47047 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATT---CCAG 47103 || ||||| | | ||| || || || |||||||| || || || || |||| Sbjct 1529 AAGAATGCAAGGATGTGTGAGATGAAGTACTTTTCATCATCTGTGAGCTTGTTGTTCCAG 1588 Query 47104 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTT 47163 || | || ||| || || | ||| | ||||| || ||||||||||| ||||| || || Sbjct 1589 TCGTGGAGATCCTTGGACAAATCAATCTCTTCGGCCGTCCAGAATGAGGCCTCGGCCTTC 1648 Query 47164 TTATACATATTCCA 47177 || ||||| | ||| Sbjct 1649 TTGTACATCTGCCA 1662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712866457351680