Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734605.1_202014-07-28] 8,881 sequences; 35,967,056 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq5528 318 5e-82 seq4110 140 3e-28 seq2576 86.0 6e-12 >seq5528 Length=4897 Score = 318 bits (352), Expect = 5e-82 Identities = 1205/1882 (64%), Gaps = 26/1882 (1%) Strand=Plus/Minus Query 22105 CTTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCC 22164 || ||| || || ||||| || | | ||||| | | || || || || |||||||| Sbjct 3627 CTGGTCGACAGTGAACTGAATCGGCTGGGCGGCTGCCTGCGTCCGCAGGTAGTACATGCC 3568 Query 22165 CGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGG 22224 ||||| ||||| | |||||| || ||||| ||||| || | || || |||| Sbjct 3567 GGTCTTGAGACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCGG 3508 Query 22225 CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGC 22284 | ||||| | |||| |||||| ||| || || || || || || || ||||| Sbjct 3507 GTCGCGCATGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCGGC 3448 Query 22285 CATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTC 22344 ||| | | | ||||| ||| || ||||| || |||||||| || | | || | || Sbjct 3447 CATCTGAACGACGGTACGTTGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGTATC 3388 Query 22345 TAACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAAT 22404 || || | || |||||| ||| || | | ||||| || || || Sbjct 3387 CTCAGGGATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTTCAT 3328 Query 22405 CGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTG 22464 || ||||| ||| | || || ||| |||| || |||| || || || Sbjct 3327 GTCGTCTGACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACTACCTG 3268 Query 22465 AAACTCGCCGGACAAG-ACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATT 22523 |||||||||| |||| || |||||||||||||||||||| || | || || || | | Sbjct 3267 GAACTCGCCGG-CAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCACT 3209 Query 22524 CATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGT 22583 | ||||| || || || || | || ||| || ||||| || || | || | || Sbjct 3208 CGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCTGT 3149 Query 22584 TTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGA 22641 | | | || || | |||| || || |||| || ||||||||| || || || Sbjct 3148 TGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTC--CCAGTCCCAGAGGTCTGA 3091 Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 ||| | || || |||||| ||||| || | | || | | || || || Sbjct 3090 AGGCTTGACGTT---CCACATGTCGTACTGGAGAATTCCCTGTGAAACAGGAGATCCCTC 3034 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTA 22761 ||| || ||| ||||| | | | ||||| | ||| || || || ||| Sbjct 3033 GTATGTCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGAGGCAGTCAGAGCAGCGTG 2974 Query 22762 ATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCTTTCGTACG 22817 || || ||||| ||||| |||||||| | || || || ||| ||| | | Sbjct 2973 GTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCTCAGGAGAC----TCGAAAG 2918 Query 22818 GCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGT 22877 ||| ||| | | ||| ||||| |||| ||| || ||||| | |||||| || | || Sbjct 2917 GCAGACGGAGTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCGATAGGCCTGT 2858 Query 22878 TTTTCAGATTCGACACTTT--TGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCT 22935 || || | || |||||| | | || || | || ||||| | | Sbjct 2857 GGCGCATGTTG--CTGTTGCGTGCCTCCTGGACGGGGTAGTAGTTGACTTCGATGATCTT 2800 Query 22936 GTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC 22995 ||| | ||| | || | || || | ||||||||||| | || Sbjct 2799 GTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTCGTATTCACC 2740 Query 22996 CGATTG-TA--CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTC 23052 | || || | || |||| | | || | || ||||| |||||||| || ||||| Sbjct 2739 CTTGTGGTAGTCGACGAACTGGGGCAGAGCCAGGGAAGCAAGGTTGCATACAGCAACCTC 2680 Query 23053 GTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAA 23112 ||| || | |||||| | ||| || || || || ||| | || || || | Sbjct 2679 GTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCGAATGGTACCAAG 2620 Query 23113 ATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGT 23172 || |||||||||| || || ||||| ||||||||| |||||| |||| | || || Sbjct 2619 GTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAACGGGTTACCAGT 2560 Query 23173 CTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTA 23232 ||| ||| | ||| | ||| | ||| | |||| || | | |||| || Sbjct 2559 CTCAGTCTGAGCCTCCAGGATGGAATACCAAAGTTTCTGGGCCTTGAT-CGTCTTGCGAC 2501 Query 23233 CCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGG 23291 ||| || | | ||| ||||| | |||| || || || || ||||||| ||||| | Sbjct 2500 CCTTACCGGCCTGCTCATACTTCTCATACAGAGCCTCGAACTCTTCACCGTAGCAGTCCG 2441 Query 23292 CCAGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTC 23351 | ||||| || | | |||| ||||| | |||| || || |||||||| Sbjct 2440 CGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCT 2381 Query 23352 TCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTT 23411 |||| || ||||| || ||||| |||||| |||||| || ||||| || | |||||| | Sbjct 2380 TCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCT 2321 Query 23412 TGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGT 23471 | ||| |||||| | | || | || || || || || || ||||||||||| |||| Sbjct 2320 TTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGT 2261 Query 23472 AAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGT 23531 | | |||||| || || || | ||| ||||| ||||| |||||||| || || ||||||| Sbjct 2260 AGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGT 2201 Query 23532 TGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACTCG 23591 || |||| | ||||| || || | ||||| || | |||| || || | | | Sbjct 2200 TGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGG 2141 Query 23592 AACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCA 23651 | || | || || | | || |||| || ||| || || || || || || |||| Sbjct 2140 AGCCAGTGGCACGGATGCGATGGACGTTGAGACCGATACCGCCAGCCATCTTGGAGATCA 2081 Query 23652 TCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCA 23711 | || || || || ||||||||||| ||||| |||||||| || || | | |||| Sbjct 2080 TGGCACAAGTCTTGAGGGTGTCGTAGATTCCCTCAATGCTGTCGTCCTTCATATCAACCA 2021 Query 23712 AGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGT 23771 ||| || || |||| || || | || || |||| ||| || |||||| ||||| Sbjct 2020 GGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGT 1961 Query 23772 GCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTC 23831 | || ||| || | ||||| || ||||| || |||||| | ||||||| || | Sbjct 1960 GTGTGAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCAC 1901 Query 23832 CGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGT 23891 | ||||| | || || ||||| ||||||| || || |||||||| | ||| | Sbjct 1900 CCCAGATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGACAATCTTGCCAT 1841 Query 23892 TAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGT 23951 | | || || || || || | | | || || || || ||||| | ||||| || | Sbjct 1840 TGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAAGCCGAAATATTGGTAGTTGAAAT 1781 Query 23952 CACGATCGTGCACTATGGCCGA 23973 |||| |||| || || || || Sbjct 1780 CACGGTCGTAGACAATAGCTGA 1759 >seq4110 Length=7843 Score = 140 bits (154), Expect = 3e-28 Identities = 305/455 (67%), Gaps = 4/455 (1%) Strand=Plus/Plus Query 57975 CTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTT 58034 || ||||| ||||| | |||||| ||||| ||||| || ||||| | || || Sbjct 7173 CTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCCATCTTC 7232 Query 58035 TGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGC 58094 ||| | ||||| || ||||||||||| || ||||| || ||||||| | || ||||| Sbjct 7233 TGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTCATCTCGCGT 7292 Query 58095 GACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG 58154 || |||||||| || || || ||||| || || ||| ||| | | | ||| | || Sbjct 7293 GATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCTGAACAACAGGCCC 7352 Query 58155 ACGCGGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214 | ||| | ||| ||| | ||| || ||| ||| || | |||||| | Sbjct 7353 AACAAGGAGGTTGTGAAGGAGATTGTTGTCGATGCTGTCAAGATTGAGCAAGAGTTTCTT 7412 Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 || || || | || ||| | || || |||||| | ||||| |||||||| Sbjct 7413 ACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAACGCCAACCTGATGAAGCAGTACATT 7472 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGA 58332 |||||||| || ||||||||| | ||| || || |||| ||| ||| | | Sbjct 7473 GAGTTTGTCGCTGACAGACTTCTTGTCGCCCTGGGAAACGAGAAGGTC--TACCGTGCCA 7530 Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaa 58392 || || || ||||||||| | ||||| |||| |||||||| ||||| ||||| | Sbjct 7531 CCAACCCATTCGATTTTATGGAGAACATCTCACTCGGCGGCAAGACCAACTTCTTCGAGA 7590 Query 58393 aaaaaGTTAGCGAATATCAAAAATACGGCGTGATG 58427 || ||| |||| || |||||| ||| || ||| Sbjct 7591 AACGCGTTGGCGAGTACCAAAAAGCCGGTGTCATG 7625 >seq2576 Length=12229 Score = 86.0 bits (94), Expect = 6e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 31202 TTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTC 31261 ||||| ||||||||||| ||||| || |||||| | || || || | || |||| || Sbjct 5660 TTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 5719 Query 31262 GAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 || | || || | || ||||||||| || | || || ||||| |||||||| Sbjct 5720 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCTT 5779 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGAC 31348 || || |||||||| |||||||| ||| Sbjct 5780 ATCTTTGCTGGCAAGCAGTTGGAGGAC 5806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445716914357520