Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734605.1_202014-07-28] 8,881 sequences; 35,967,056 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq8361 123 2e-23 seq2576 84.2 2e-11 >seq8361 Length=14611 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || || || || | |||||||| ||||| |||||||| ||| Sbjct 3808 ATACCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCG 3867 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || ||| || | || || |||||| |||| || ||||||||||||||| Sbjct 3868 GACAGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGA 3927 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| ||||| ||| | | |||| ||||| | || ||| Sbjct 3928 GGAATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCG 3987 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | || ||||| |||| ||| || || || ||||||||| Sbjct 3988 ACCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 4038 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || ||||| |||||||| ||| | || ||| || ||||| || || |||||| | Sbjct 4075 TCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAA 4134 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || || || ||||||||||||||||| || || ||||| ||||| |||| | Sbjct 4135 ATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGGATCTTCGACTTTACATTG 4194 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | ||| |||| ||| ||||| |||| ||| | ||| ||||| || || ||||| || Sbjct 4195 TCGATGGTATCGGAGGACTCGACCTCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACG 4254 Query 114372 AAAATCTGCATG 114383 |||||||||||| Sbjct 4255 AAAATCTGCATG 4266 >seq2576 Length=12229 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 || || |||||||| ||| | |||||| || || | || || ||||| |||| Sbjct 5838 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGATA 5779 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314 |||||||||||||| || ||||| || || ||||| |||||| || | | || Sbjct 5778 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 5719 Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373 | ||||| | ||| ||||| |||| ||| | || ||||| |||||||| || || || Sbjct 5718 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 5660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420088925834172