Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734605.1_202014-07-28] 8,881 sequences; 35,967,056 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq690 105 3e-17 >seq690 Length=16481 Score = 105 bits (116), Expect = 3e-17 Identities = 124/163 (76%), Gaps = 5/163 (3%) Strand=Plus/Minus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||| || ||||||||||| |||||||| | |||||||||| |||||| Sbjct 12414 CTCGATCAAATGGGCAATTGTCATACGAGATGGAATGGCGTGCGGGTTGATGATAATGTC 12355 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTC-TTCAGGTACAATCAAACCAA 309802 ||| | || || | ||| |||| ||||| ||||| | ||| | | ||||| Sbjct 12354 AGGAGTAATACC-CTCCCTGG--TGAATGGCATGTCTTCGTGTCTGTA-TGTGACACCAA 12299 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 | || ||||||||| |||||||||| || ||||||||||| || Sbjct 12298 TCGTACCCTTTTGACCGTGCCTGGATGCGAACTTGTCACCGAT 12256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951752289102968