Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734635.1_202014-07-28] 9,202 sequences; 35,774,258 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq5828 170 4e-37 seq2408 152 9e-32 seq9101 129 1e-24 seq689 127 4e-24 seq8800 89.7 9e-13 >seq5828 Length=11365 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| || || || || ||||||||||| || ||||| Sbjct 3816 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 3875 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || |||||||| || ||||| || |||| |||||||| || ||| Sbjct 3876 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 3935 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||| ||||| | || || || || ||||||| || || || Sbjct 3936 ATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACC 3995 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || ||||| | ||||||||||| |||||||| Sbjct 3996 TCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 4042 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| || | || | ||| || || ||||| || || || || ||||| || Sbjct 3588 CCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGAC 3647 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || || ||||| || | |||||| || || || || | | ||||||||| || || Sbjct 3648 AGGGTTCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGG 3707 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||||| |||||| ||||| ||||||| ||||| ||| Sbjct 3708 ATACCCTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACT 3767 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||||| || || || ||||||||||| || ||||| Sbjct 3768 TCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 3814 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||||| || || ||| ||| ||||||||||| || ||||| Sbjct 4044 CCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 4103 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| || || || | |||||| || ||||| || || | ||||||||| || ||| Sbjct 4104 AGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGA 4163 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || |||||||| || ||||| | ||| || |||||||| || | || || || Sbjct 4164 ATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCGATGGTATCGGAGGACTCGACC 4223 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| || || || || |||||||| |||||||| |||||||| Sbjct 4224 TCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCAT 4270 >seq2408 Length=15588 Score = 152 bits (168), Expect = 9e-32 Identities = 174/231 (75%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| || | ||| || ||| ||| || |||||||| || ||||| Sbjct 12024 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 11965 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || ||||| || || || | |||||| ||||| || || | | || ||||| || || Sbjct 11964 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGG 11905 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| || ||||| | |||||| ||||||||||| ||| || || || Sbjct 11904 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTC-GCTCGACTCCAC 11846 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 || | |||||| || || |||||||||||||||||||| |||||||| || Sbjct 11845 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGAT 11795 >seq9101 Length=24267 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || |||||||| || | || || || |||||||| || || || || Sbjct 18402 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGATA 18461 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | |||||||| || ||||| || |||||||| |||||||| | ||| || ||| Sbjct 18462 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 18521 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 || ||||| | || || || |||||||||||||| || || || || ||||| ||||| Sbjct 18522 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 18580 >seq689 Length=14980 Score = 127 bits (140), Expect = 4e-24 Identities = 662/1041 (64%), Gaps = 48/1041 (5%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 |||||||||||||||| | || || |||||| |||||| || || ||| |||||| Sbjct 3835 CGCCACTGGATGTACTCGGAAGGAGTGCTGTCCAAGTGGTTGTCGATGTGGGCGAAAGCG 3894 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| | ||| || || || ||||| |||| | | || ||| || Sbjct 3895 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCAGCAGTGGGG 3954 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 ||| || || ||||| |||||||| |||| ||| || ||||| ||||| ||||| Sbjct 3955 ATAAGCTCACCAGTCAGGACGTTGATGAGAGTAGACTTTCCGGCACCGTTGGGACCAATG 4014 Query 225161 ACGCCAATCCGGGATG--ACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGGGC 225218 ||| |||| ||||| | | ||| ||| || | | || ||||| || ||| Sbjct 4015 ACGGCAATACGGGAACCAAGAGAGCA--CTGGAAGGTGATGTCGCTGA-----TCTGGGG 4067 Query 225219 CAGTTTGGTAAGCAAAGGCCACGCCAC--GCAG--CTTCATGATGGCACGGT-------- 225266 | |||| || | ||| | || | || | || || |||||||| Sbjct 4068 C---TTGG--AGGTA---CCAGGGTACTGGAAGTCCATCTTGGTGGCACGGAGAATGGCC 4119 Query 225267 ----CCTTGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACC 225322 |||||| | | |||||| ||||| |||||||||||||| ||| || | Sbjct 4120 TTGGCCTTGGTCTTGACACCCTCGAGGAAACCGGGCTCGGGGAAGGTGAACTCCATCTCA 4179 Query 225323 GCGTCCTTCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGG 225382 | | | || ||||||||||| ||| ||| | ||| ||||| | |||| Sbjct 4180 GAGGCACCGAGCTCGTAGTAAGACTTGGCCGAGGGGCACTTCTTGACGAACTCCTTCAGG 4239 Query 225383 TTTCCGAGGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACAC 225441 || || ||| | ||||||||| || |||| ||||| || ||| | ||| || Sbjct 4240 TTACCACGGTAACGCTTGAGCTTGAAACGCT---CGTAGTGAACGATGTGCTG-GCAGAC 4295 Query 225442 TGCGTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAGGCCCT 225500 ||| ||||||| |||||||| ||||| |||||||| | || | | || | | Sbjct 4296 GTTGTCGAGGAAGCTGGAGTCGTGCGACACGATGATGGAGGTGCAAG---GGGAGTTC-T 4351 Query 225501 TGAGGTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCA 225560 ||||| | ||||| ||||| | ||||||| |||||| || || ||||| | Sbjct 4352 GGAGGTACTCCTCAAGCCACTTGACGTTCTTCACGTCCAAGTGGTTGGTGGGCTCGTCGA 4411 Query 225561 GAAGCAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGC 225620 | | ||| || |||| | | || || ||| || |||| ||||||||| ||||| | Sbjct 4412 GCAACAGAATATCAGGAGCCTCGAAGACGGCACGGCACAGAGCCAGCTTCATCTTCCAAC 4471 Query 225621 CCCCGGACAGGGAGCCGATTGAAACAGAGTGCTTAGCTTCGTCAAAGCCGTACTCCAGGA 225680 | ||||| || | | ||| | |||| | | | ||| || ||| |||| || Sbjct 4472 CACCGGAAAGAGCGGTGATCTCACCAGAAACCATGGAGTCGGTGAAACCGAACTCGTTGA 4531 Query 225681 GCGTCTGGATAATGCGCTCGGGAG-AGCTGCGAGC--GGCAACGTTGGGGTCGGACGAGA 225737 | || || | | |||| | | | | | || | ||| | | | | | | Sbjct 4532 GGCGCTTGACGACGTCCTCGCGGGTAACCGAGACCTTGGCCTCCTCCAGCTTCTTCATGG 4591 Query 225738 GGTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACACCG 225797 | || |||||| || | | ||| | ||||| |||||| || ||| | || | Sbjct 4592 TCCAGTCGATGGTGGTCATCTCAGTGTCAGCAGAGTCAAGGTCGTGCTCGACGAAGACGG 4651 Query 225798 TCCGGAGCT-GAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAGC 225856 || || || | || | |||||| ||||| | ||| | || || || || | Sbjct 4652 TCTTGACCTCGCTCTGCTT-GGGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATG 4710 Query 225857 AGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGATG 225916 ||||| ||| || | |||||||| ||| || |||||| | | || ||||||| Sbjct 4711 AGGGTGGACTTTCCGGAACCGTTGGGGCCGCAAAGACCGTAACGCTGGCCACGCTTGAGA 4770 Query 225917 TTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATCG 225976 ||| | || ||| || || |||||| |||| ||||| || |||||| ||| | | Sbjct 4771 CGGAGATGGGTCTGGTTGAGAAGAATCTTGGCACCGTAGGCGAGCGAGAACGTGCAGTTG 4830 Query 225977 CACAGGTCCTCACCCTCCTCG 225997 ||||||||||||||||||||| Sbjct 4831 CACAGGTCCTCACCCTCCTCG 4851 >seq8800 Length=5726 Score = 89.7 bits (98), Expect = 9e-13 Identities = 259/394 (66%), Gaps = 10/394 (3%) Strand=Plus/Minus Query 176892 ACAATTGGAGTCACGAAGCGCTTGAGGAACCCGGGGATCTCGAGCAGCGACGGGAACTGT 176951 |||| ||||| | ||| || || ||| ||||||||| ||||| || |||||||| Sbjct 2294 ACAACCGGAGTGATGAACTCCTGGAAGAAGTCGGGGATCTGCAGCAGAGAAGGGAACTGC 2235 Query 176952 GCATGGAAAAAGTTCAGCACTAGACCAGCAATATGTGAGCCGTCAACGTCCTGGTCTGCC 177011 | |||| ||||| | | ||||| ||||| ||||| ||||| || ||| Sbjct 2234 ACTTGGAGGAAGTTTATGAGAAGACCCTTGATATGACTTCCGTCGTGATCCTGATCAGCC 2175 Query 177012 ATAATAATCACAGACCCGTACCGAAGAGAGGACGCGTCCTTGTAGTTCACACCATTGCG- 177070 || || |||| | || || |||||| | ||| |||| | ||| ||| | Sbjct 2174 ATGATCATCAGATGACCATATCGAAGACCCTTGGTGTC--TGTA-TACACCTGTTTGTGT 2118 Query 177071 --GAGACCGAGAATTTGTTTGATGGCAGTAATCTCGGCGTTGTTAGTAATACTAGACACA 177128 |||||| || | |||||||| ||||| ||| || || | | Sbjct 2117 TTGAGACCCAGGAACTGTTTGATATTTTGGATCTCCTTGTTCTTCAGGATCTGATCTATG 2058 Query 177129 GACGCATCACGGACATTCAGTAGCTTACCACGGAGGGGGAAAATTCCGTAGCGATCCCGA 177188 || ||||| || |||||||| | |||||| | ||||||||| | ||| ||| || || Sbjct 2057 GATGCATCTCGCACATTCAGCATCTTACCCCTGAGGGGGAACACGCCGATGCGGTCTGGA 1998 Query 177189 CCCACGACAGCAAGGCCAGCTGTGGCAAGCGTGGCGGCAGAGTCACCCTCTGTCAAAATG 177248 ||| || ||| ||||||| || || ||||||||||||||| ||||| | Sbjct 1997 TCCAGGATGGCACGGCCAGCAACCGCCAGACCACGGGCAGAGTCACCCTCAGTCAACACT 1938 Query 177249 AGCGTGCACATTCCAGA--GTGCTTCGTGCCCGC 177280 ||||||||| || || |||||||||||| || Sbjct 1937 AGCGTGCAC--TCATGACCGTGCTTCGTGCCTGC 1906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921516390383440