Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734635.1_202014-07-28] 9,202 sequences; 35,774,258 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4767 262 7e-65 seq5132 134 3e-26 >seq4767 Length=4978 Score = 262 bits (290), Expect = 7e-65 Identities = 840/1280 (66%), Gaps = 51/1280 (4%) Strand=Plus/Minus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 ||||| ||||||||||||||||||||||||||| |||||||||| || | ||||| || Sbjct 3071 GTCAGAGCAGCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGA-TCACGAGCCTCAGG 3013 Query 221476 AGAAGTGAAGGGCATACGCAG--CATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATA 221533 ||| ||| |||| ||| || || ||||| |||| ||||| || || || || | | Sbjct 3012 AGACTCGAAAGGCAGACGGAGTGCAAG-GAAAG-CGTCAGCCAGACCTTGGACGCCCAGA 2955 Query 221534 CCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGA 221591 ||||| |||||||| | | ||||| | ||| | || |||| ||||| || |||||| Sbjct 2954 CCGATAGGCCTGTGGCGCATGTTGCTGTTGCGTGC-CTCCTGG-ACGGGGTAGTAGTTGA 2897 Query 221592 CGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGT 221651 | ||||| | ||||||||||| || | ||||| | ||||| || |||| Sbjct 2896 CTTCGATGATCTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCT--- 2840 Query 221652 GATTGAACACCAACTCGC---CGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAA 221708 | || ||| | || | |||| | || || || | || || | Sbjct 2839 ---------CAAAGTCGTATTCACCCTTGTGGTAG---TCGACGAACTGGGGCAGAGCCA 2792 Query 221709 CGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTAC 221768 | || ||||| || || || |||||||| | | |||| || ||||| || | Sbjct 2791 GGGAAGCAAGGTTGCATACAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGC 2732 Query 221769 AGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG- 221827 |||||||| || ||||| || |||| || || || |||||| ||| ||| | Sbjct 2731 AGAGGTTGGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGTGA 2673 Query 221828 TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAG 221887 |||||||| ||||| || || |||||||| ||||||| |||| || | ||| Sbjct 2672 TCCTTGTACAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAATACCAA 2613 Query 221888 AGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCT---CGGTCTTTTCATAC--CCGG 221942 |||| ||||| || || ||||| ||||| ||| || |||||| | Sbjct 2612 AGTT-TCTGGGCCTTGA--TCGTCTTGCG---ACCCTTACCGGCCTGCTCATACTTCTCA 2559 Query 221943 TATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGAC 222002 || ||||| | | |||| ||||||||| || | ||||| || ||| | || | Sbjct 2558 TACAGAGCCT--CGAACTCTTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGC 2501 Query 222003 ACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACA 222062 |||||| |||||| ||| | | || | || |||||| || || |||||||| | Sbjct 2500 ACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAA 2441 Query 222063 GCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCA 222122 | || | || || || | || || ||||||| |||| ||| ||||| || || | Sbjct 2440 GAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGA 2381 Query 222123 AAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCT 222182 ||||| || | || |||||||||||||| || |||| ||| | || ||||| |||| Sbjct 2380 GGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCT 2321 Query 222183 TGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCA 222242 ||||||||||||| || || | | |||||| | || || | || || | Sbjct 2320 TGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAA 2261 Query 222243 GTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGG 222302 ||||| || |||||||| || || || | || ||| | | | | | Sbjct 2260 TGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCACGGATGCGATGGA 2201 Query 222303 CAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCA 222362 | | |||||||| || || || ||||||||||| || ||||||| ||||| Sbjct 2200 CGTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGT 2141 Query 222363 TGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATT 222422 ||| ||||| || ||| ||||| | | | ||| || || ||||||| ||||| | Sbjct 2140 AGATTCCCTCAATGCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCT 2081 Query 222423 TGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCA 222482 | | | |||||| || ||||| || ||||||||| ||| | |||||||| | Sbjct 2080 GCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAA 2021 Query 222483 GATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGA-ATCTGCATGGCGCATCT 222540 | | ||| || || | ||||| | |||||||| ||| || | || || || | Sbjct 2020 GGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCAGATACCTACA--GCAACACG 1963 Query 222541 CATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGAT 222598 |||| ||||| ||| |||||||| ||| || | ||||| | ||||| || Sbjct 1962 CATGATCATGTGCTGTGGCCTCTCGACAATCTTGCCATTGAGCT--TCAATAGGTAAGAC 1905 Query 222599 TTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCG 222658 | || ||||||||||| || || || | | || || || | | ||| || | || Sbjct 1904 CTCTCGAGAGTCTTGAAGCCGAAATATTGGTAGTTGAAATCACGGTCGTAGACAATAGCT 1845 Query 222659 GCGTCCAGCTCCGACTTGTG 222678 | ||| || ||| |||||| Sbjct 1844 GAGTCGAGATCCTCCTTGTG 1825 Score = 93.3 bits (102), Expect = 8e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 221065 CATCTCGTCCGTCCATAGACCCCTCTCTTCCAGCACCTTGACCATGTGCTTGTTCACCAC 221124 ||| ||||| | ||| ||||| ||| |||| |||||| || ||| || || Sbjct 3414 CATGTCGTCTGACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACTAC 3355 Query 221125 TTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGGTTCGATGCT 221184 ||||| || || | ||||| | | ||||| | ||| ||||| | || || | || Sbjct 3354 CTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCA 3295 Query 221185 CTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCAGACT 221244 |||||||||||| ||||| || | |||||| || || |||||||| || || |||| || Sbjct 3294 CTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCT 3235 Query 221245 GTTGCG 221250 |||||| Sbjct 3234 GTTGCG 3229 >seq5132 Length=7807 Score = 134 bits (148), Expect = 3e-26 Identities = 344/525 (66%), Gaps = 27/525 (5%) Strand=Plus/Minus Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869 ||| ||||| | |||||| ||||| ||| |||||||| | | ||| | || Sbjct 703 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAGTCAACC 644 Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929 |||| | ||| ||| | || || |||| || ||||| ||||| ||||||||| | ||| Sbjct 643 TTTGCCACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTT 584 Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGA 25988 || ||||||||||||||||| || || ||||| || ||| ||||| |||||||| Sbjct 583 GCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTG-ACTTTCTCCAACGA 525 Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCC- 26047 ||||||| | || |||||||| |||| || |||||||| || || | | || || Sbjct 524 GCTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCT 465 Query 26048 -----ACTTGCTCCACAA--ACCTTCTCAA-GAGACCGTCTACAGTATCATCAAAGAGGC 26099 || || | |||| | || | || |||| || | || || || Sbjct 464 GAACAACAGGCCCAACAAGGAGGTTGTGAAGGAGATTGT------TGTC------GATGC 417 Query 26100 TGTGGAGATCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAA 26159 ||| |||| ||| | ||||||| |||||||||| Sbjct 416 TGTCAAGATTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAA 357 Query 26160 CAACAGACTCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGC-TGT-GCCAGCTG 26217 | || || |||| || |||||||||| ||| || ||| || | ||| ||| ||| Sbjct 356 CGCCAACCTGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCC--CTG 299 Query 26218 GGACTCGCCAGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTG 26277 ||| || | ||||| || | | ||||| ||||| |||||||| ||||| || | Sbjct 298 GGAAACGAGAAGGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACTC 239 Query 26278 GAAGGGAAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322 | || |||||||||||||| || || | || ||||| || ||| Sbjct 238 GGCGGCAAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTACCAA 194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928737959626880