Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734635.1_202014-07-28]
9,202 sequences; 35,774,258 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq4767 167 3e-36
>seq4767
Length=4978
Score = 167 bits (184), Expect = 3e-36
Identities = 410/614 (67%), Gaps = 22/614 (4%)
Strand=Plus/Minus
Query 117805 TGAACTGAATGGGTCT---CGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGA 117861
|||||||||| || || || || |||| | || ||||||||||| || |||||||
Sbjct 3700 TGAACTGAATCGG-CTGGGCGGCT--GCCTGCGTCCGCAGGTAGTACATGCCGGTCTTGA 3644
Query 117862 GCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTTTCCA 117921
| || |||||||| | | |||||| |||| | |||| | ||| || ||
Sbjct 3643 GACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCGGGTCGCGCA 3584
Query 117922 TGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAA 117981
|| || ||| | ||||| || || |||||| || || || || ||||| | ||
Sbjct 3583 TGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGAA 3524
Query 117982 TCACA-TCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGG 118040
|| | | | | ||| ||||| |||||| ||||||| ||||| |||| || |||
Sbjct 3523 CGACGGTACGTTG-CGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGTATCCTCAGGG 3465
Query 118041 ATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATCCTTT 118100
|| | || || |||||||| || ||| | || || | | |||||| || | |
Sbjct 3464 ATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCTTCATGTCGTCT 3405
Query 118101 GACCAGAGACCAATCTTTTTGAGATCCT----CCACGAGATGCTTATTGACAACAACAAA 118156
||||| ||||||| || ||||||| | || || | ||||| || ||
Sbjct 3404 GACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGG----TTGACTACCTGGAA 3349
Query 118157 CTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCATT 118216
||| || || || || | | || || |||| || || |||||||||||||| ||
Sbjct 3348 CTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCACTCGTT 3289
Query 118217 GTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACG 118276
||| || | |||||| | ||| ||||| |||||||| || | ||| | |||||| ||
Sbjct 3288 GTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCTGTTGCG 3229
Query 118277 GAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTTT---GT 118333
|| ||| | || | | ||| ||||||||||||||||||| | ||| | | |
Sbjct 3228 GACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCA---GAGGTCTGAAGG 3172
Query 118334 CTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGT 118393
|| | | |||||| || ||||||| || || || || | || |||||||| ||||
Sbjct 3171 CTTGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACAGGAGATCCCTCGTATGT 3112
Query 118394 CTCATATGGGCCCT 118407
| ||||| ||||
Sbjct 3111 CGAGTATGGACCCT 3098
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618364064491120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |