Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734635.1_202014-07-28] 9,202 sequences; 35,774,258 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq8172 127 2e-24 seq8173 120 3e-22 >seq8172 Length=1361 Score = 127 bits (140), Expect = 2e-24 Identities = 157/213 (74%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 6499 GAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATGTGGTT 6558 ||||| ||||||||| | ||||| || | |||||| ||||||| |||| ||||| Sbjct 1085 GAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCGTCCGGAGTGCGTCGACGTGGTC 1144 Query 6559 CAGGTAGATATGCGCATCCCCCA--ACGTATGCACCAGCTCCCCAGGAACCAACCCCACG 6616 ||||| || ||||| |||| |||| || |||| ||| || || | ||| | Sbjct 1145 GGCGTAGACGTGAGCATCGCCCATGACGT--GCGTCAGCGACCCGGGCACTAGACCCGTG 1202 Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 || | || ||||||| ||| ||||| ||||| || ||||||||||| ||||| |||| Sbjct 1203 GCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGGCACGCCTAGG 1262 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAG 6709 |||||||| | || || || |||||||||||| Sbjct 1263 CCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 1295 Score = 127 bits (140), Expect = 2e-24 Identities = 157/213 (74%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 |||||||||||| || || || | |||||||| |||| ||||| ||||||||||| || Sbjct 1295 CTGCCAGCTCTACCAGCGGTCCTGCGACATGGGCCTAGGCGTGCCCTTCAACATTGCCAG 1236 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755 ||||| ||||| ||| ||||||| || | || | ||| | || || ||| |||| Sbjct 1235 CTACGCACTGCTGACGCACATGATTGCGCGTGCCACGGGTCTAGTGCCCGGGTCGCTGAC 1176 Query 34756 GCATACGT--TGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAG 34813 || |||| |||| ||||| || ||||| ||||| |||| ||||||| ||| Sbjct 1175 GC--ACGTCATGGGCGATGCTCACGTCTACGCCGACCACGTCGACGCACTCCGGACGCAG 1118 Query 34814 CTGCAACGAGAGCCCCGACCGTTCCCCCAGCTC 34846 ||| | || ||||| | ||||||||| ||||| Sbjct 1117 CTGGAGCGCGAGCCGAGGCCGTTCCCCGAGCTC 1085 >seq8173 Length=1034 Score = 120 bits (132), Expect = 3e-22 Identities = 190/270 (70%), Gaps = 2/270 (1%) Strand=Plus/Plus Query 6854 AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAG 6913 |||||||| | ||||| |||| ||||| || | || | || || || |||||| Sbjct 83 AGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCGGCGCCAAAG 142 Query 6914 TGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCC 6973 || | ||| ||||| |||||||| ||||||| ||||||| |||| || | || ||| Sbjct 143 TGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGCTGCAATCCC 202 Query 6974 CGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACG-A 7032 || |||||| || || || |||| ||||||||||||| | |||| | | || Sbjct 203 AGCCCGTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGA-CCCCGGCGTCGCT 261 Query 7033 GAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTT 7092 || ||| | ||| || ||| |||||||||||||||||| || |||| || Sbjct 262 CAGGGGCTTCGCCGACGTCGCGCCCGACACGAACCACAGCAGCTCGAGGATCACGGCCCG 321 Query 7093 CCAGTACACACGTTTCGTCGTCAGCAGCGG 7122 | || | || || |||||||||||||| || Sbjct 322 CGAGAAGACGCGCTTCGTCGTCAGCAGAGG 351 Score = 120 bits (132), Expect = 3e-22 Identities = 190/270 (70%), Gaps = 2/270 (1%) Strand=Plus/Minus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 || |||||||||||||| || || | || | || |||| || ||||||||||||||| Sbjct 351 CCTCTGCTGACGACGAAGCGCGTCTTCTCGCGGGCCGTGATCCTCGAGCTGCTGTGGTTC 292 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCT-CGTCCCGGGGGGTGAAGATCTGGGACGC 34341 ||| ||| || ||| | ||| || || | | |||| | ||||||||||||| Sbjct 291 GTGTCGGGCGCGACGTCGGCGAAGCCCCTGAGCGACGCCGGGG-TCAAGATCTGGGACGG 233 Query 34342 TCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTT 34401 |||| || || || |||||| || ||| || | || |||| ||||||| | Sbjct 232 CAACGGCAGCCGTGAGTTCCTGGACGGGCTGGGATTGCAGCACCGCGAGGTGGGCGACCT 173 Query 34402 GGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGC 34461 |||||| |||||||| ||||| ||| | |||||||| || || || | || | || Sbjct 172 GGGCCCCGTCTACGGCTTCCAATGGCGCCACTTTGGCGCCGAATACACCGACTGCCACGC 113 Query 34462 GGACTATTCGGGACAGGGAGCGGACCAGCT 34491 ||||| |||| ||||| | |||||||| Sbjct 112 AGACTACACGGGCCAGGGCGTCGACCAGCT 83 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448210838617440