Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734635.1_202014-07-28] 9,202 sequences; 35,774,258 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq8172 107 1e-18 seq8173 93.3 3e-14 >seq8172 Length=1361 Score = 107 bits (118), Expect = 1e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 27087 CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGG 27146 |||||| ||| || ||| || || || ||||| | ||| ||||| ||| || | Sbjct 1073 CCTGTTGATCTCGAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCGTCCGGAGTGC 1132 Query 27147 TTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTC 27206 || ||||| || |||||||||||| || |||| | ||| | | || || | Sbjct 1133 GTCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCAC 1192 Query 27207 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 27266 ||| || ||| | | || ||||||| ||| || || | ||||||||| ||||| ||||| Sbjct 1193 TAGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGG 1252 Query 27267 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308 || || || |||||||| | |||| |||||||||||| || Sbjct 1253 CACGCCTAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCA 1294 >seq8173 Length=1034 Score = 93.3 bits (102), Expect = 3e-14 Identities = 231/347 (67%), Gaps = 4/347 (1%) Strand=Plus/Plus Query 27378 GTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAG 27437 ||| ||||||||||| || | | | ||||| | ||| | ||||| | | || Sbjct 7 GTCCTTGGGGTTCCAAGCACTAAGAACCATGCGGCGGTCGTACGGGTTCGTGCGGAGCTT 66 Query 27438 GTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACCCTCATGTCCGT 27497 || |||| | | ||||| || || ||| |||| ||||||| | ||| || Sbjct 67 GTGCACGACCTCGGCGAGCTGGTCGACGCCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGT 126 Query 27498 GTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTC 27557 ||| || || || || || | ||||||||| ||||| || || |||||||| ||| | || Sbjct 127 GTATTCGGCGCCAAAGTGGCGCCATTGGAAGCCGTAGACGGGGCCCAGGTCGCCCACCTC 186 Query 27558 CCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTT 27617 | ||||| || ||| | ||||| || || | | |||||| ||||||||||||| Sbjct 187 GCGGTGCTGCAATCCCAGCCCGTCCAGGAACTCACGGCTGCCGTTGCCGTCCCAGATCTT 246 Query 27618 TACCCC--CTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGC 27675 ||||| | || | || | ||| | | || | || ||||||||||||||| Sbjct 247 GACCCCGGCGTCGCTCAG-GGGCTTCGCCG-ACGTCGCGCCCGACACGAACCACAGCAGC 304 Query 27676 TCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 27722 || | |||||| | | ||||| | ||| ||||| || || || Sbjct 305 TCGAGGATCACGGCCCGCGAGAAGACGCGCTTCGTCGTCAGCAGAGG 351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369465759998462