Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734635.1_202014-07-28]
9,202 sequences; 35,774,258 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq5828 145 2e-29
seq2408 129 1e-24
seq9101 116 9e-21
>seq5828
Length=11365
Score = 145 bits (160), Expect = 2e-29
Identities = 145/188 (77%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| |||||||| ||||| ||||| || || ||||| ||| | ||||| || ||| ||
Sbjct 4267 CAGATTTTCGTCAAAACCCTCACTGGCAAGACGATTACCTTGGAGGTCGAGTCCTCCGAT 4208
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||||| |||||||| || || || ||||||||||| |||
Sbjct 4207 ACCATCGACAATGTAAAGTCGAAGATCCAGGACAAGGAGGGTATTCCTCCGGACCAACAA 4148
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||| ||||| ||||| ||||| || || || |||| ||| |||| || ||| ||
Sbjct 4147 CGCCTTATTTTCGCTGGAAAGCAGCTTGAGGACGGTCGGACCCTTTCCGACTACAACATC 4088
Query 178104 CAAAAAGA 178111
||||| ||
Sbjct 4087 CAAAAGGA 4080
Score = 132 bits (146), Expect = 1e-25
Identities = 153/205 (75%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || ||| | || || || || ||||| | ||||| || ||||||
Sbjct 4039 CAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCAGAC 3980
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || || ||| ||||| || ||||| || || || ||||||||||| ||
Sbjct 3979 ACGATTGACAATGTTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAACAG 3920
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||| |||||||| ||||| ||| | || |||||| | || || |||| || ||| ||
Sbjct 3919 CGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAACATC 3860
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
||||| ||||| || ||||| ||||
Sbjct 3859 CAAAAGGAATCTACTCTGCA-CTTG 3836
Score = 127 bits (140), Expect = 5e-24
Identities = 132/172 (77%), Gaps = 6/172 (3%)
Strand=Plus/Minus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCA 177999
|||| || || || ||||||||||||||||| ||| || |||||||| |||||||
Sbjct 4476 TCACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGC---GATACCATCGACAACGTCA 4420
Query 178000 AACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCG 178059
| ||||| |||||||| || || |||||||||||||| || || ||||| || ||||
Sbjct 4419 AGTCGAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTTATTTTTGCCG 4360
Query 178060 GAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGA 178111
| || || ||||| || || |||| ||| |||| || ||| |||| || ||
Sbjct 4359 GCAAGCAACTCGAGGACGGTCGGACACTTTCCGACTACAACATCCAGAAGGA 4308
>seq2408
Length=15588
Score = 129 bits (142), Expect = 1e-24
Identities = 144/191 (75%), Gaps = 6/191 (3%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980
|| || ||||| || || ||||| || || || |||||||| |||||||| |||
Sbjct 11801 CAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC--- 11857
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
||||||||||| || ||||| ||||| |||||||| || || ||||| |||||||||
Sbjct 11858 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 11917
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| || | ||||| ||||| || ||||| || || || ||||| || |||| || |||
Sbjct 11918 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 11977
Query 178101 GTCCAAAAAGA 178111
|||| || ||
Sbjct 11978 ATCCAGAAGGA 11988
>seq9101
Length=24267
Score = 116 bits (128), Expect = 9e-21
Identities = 133/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
|||||||| ||||| || || || || |||||| | ||||| || ||| ||||| |||
Sbjct 18580 TTCGTGAAGACTCTGACTGGCAAGACCATCACCTTGGAGGTCGAGTCCTCGGACACGATC 18521
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || || || |||||||||||||| || ||||| || || ||||| || || |||
Sbjct 18520 GACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCTGACCAACAGCGTCTT 18461
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||| || || || ||| | || || || | ||||| |||| || ||| |||| ||
Sbjct 18460 ATCTTTGCTGGCAAGCAGTTGGAGGACGGCCGTACTCTCTCCGACTACAACATCCAGAA 18402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203589279339188
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |