Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734655.1_202014-07-28] 8,594 sequences; 37,097,895 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2956 168 1e-36 seq4862 141 1e-28 >seq2956 Length=8211 Score = 168 bits (186), Expect = 1e-36 Identities = 455/681 (67%), Gaps = 14/681 (2%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCT-CAGATAGTACATGC 203897 || ||| || ||||||||||| | | |||| | ||||| || ||| |||||||||| Sbjct 6945 CTGGTCGACAGTGAACTGAATCGGCTGGGCGGCTG-CCTGCGTCCGCAGGTAGTACATGC 6887 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 ||||||| || || || ||| ||| | ||||| || | | |||| || | | | Sbjct 6886 CGGTCTTGAGACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCG 6827 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 ||||| |||||| ||||| || |||||| ||||| ||| ||||| || || || ||| Sbjct 6826 GGTCGCGCATGTGGATGTTGAGCGACTGGGACTGGTCAATG-AAGGCACCACGGTCAGCG 6768 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075 ||||| | | | ||| ||||| |||||||| || |||||| | | | ||| |||| Sbjct 6767 GCCATCTGAACGACGGTACGTTGCGAGATCTCCCAAACAGTCTTGTAGAGCTTCT-TGGT 6709 Query 204076 GTGTTGAGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCC 204134 | | ||| | || | | || || ||| ||||| ||||| || | | || Sbjct 6708 ATCCTCAGGGA-TGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATACGGTTCT 6650 Query 204135 TCGTCTCCTCCCCCCACATGCCCAACCT-GATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | || || ||||| | |||| || || ||| ||| | || |||||||| Sbjct 6649 TCATGTCGTCTGACCACA-GACCAAGCTCGACCAGATCCTTGAGCAACCAGGGGTTGACT 6591 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || |||| ||||| | || | | | |||| || | || || || Sbjct 6590 ACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAG 6531 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 |||||||||||| | || || | ||||| || || |||||||| || | ||||| | Sbjct 6530 CACTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAG 6471 Query 204314 GAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCA 204373 |||||| ||||| | || | || || ||| |||| | |||||| || | Sbjct 6470 CTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTC--CCAGAGGT 6413 Query 204374 CTG--GGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCT 204431 ||| || || ||| |||||||||| |||| | || || || || || |||| Sbjct 6412 CTGAAGGCTTGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACAGGAGATCCCT 6353 Query 204432 TGTACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGAT 204491 ||| |||| || || | ||| ||||| |||||||| ||||| | || || | Sbjct 6352 CGTATGTCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGAGGCAGTCAGAGCAGCGT 6293 Query 204492 AGTACATGGTCTCAAAGATCT 204512 ||| |||||||||||||||| Sbjct 6292 GGTAGATGGTCTCAAAGATCT 6272 Score = 104 bits (114), Expect = 4e-17 Identities = 437/678 (64%), Gaps = 28/678 (4%) Strand=Plus/Minus Query 204931 CTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTC 204990 || |||||| ||||||||| ||| |||||||||| ||||||||| | || |||| Sbjct 5934 CTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAACGGGTTACCAGTCTC 5875 Query 204991 CATCTGAGATCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCA----CTTGCTTCACGT 205046 |||||| ||| ||| ||| | || | |||| | ||||| | | | Sbjct 5874 AGTCTGAGCCTCCAGGATGGAATACCAAAGTTTCTGGGCCTTGATCGTCTTGCGACCCTT 5815 Query 205047 ACATCCCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCA 205106 || ||| ||| || || ||||| ||| | || || |||||| |||| Sbjct 5814 ACCGGCCTG----CTCATACTTCTCATACAGAGCCTCGAACTCTTCACCGTAGCAGTCCG 5759 Query 205107 TCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTC---ACCC 205163 || || || || | || || ||||||| | ||| | ||| |||| || | Sbjct 5758 CGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAG---TCGCCGTTTTTCTCAACGC 5702 Query 205164 TCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGT 205223 || ||| ||||| || |||||| || || ||||| |||||||| | ||| | | Sbjct 5701 GCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCT 5642 Query 205224 CGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCT 205282 | | ||| ||||||| | | ||| || || || | | || |||||||||||||| Sbjct 5641 CCTTTCCGTGGTTCTTCCTTAGGTCGAGG-AACTCGAAGACATCTGCGTGCCACGGCTCA 5583 Query 205283 AACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATC 205342 | | | ||| | || || || | |||||| ||||||||||| || ||||| | Sbjct 5582 AGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTG 5523 Query 205343 GCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATG 205402 |||||| || |||||||| || || | ||||| | ||| ||||| || | | ||| Sbjct 5522 TTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATA 5463 Query 205403 GCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCG----CGCCAATCCCGCCAGAACACTT 205458 |||| ||| |||| | ||||| || || || ||||||| ||| Sbjct 5462 TAGGAGC---CAG-TGGCACGGATGCGATGGACGTTGAGACCGATACCGCCAGCCATCTT 5407 Query 205459 GGCGATCTGGGCGC-ACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCA 205517 || |||| ||| | | ||||| || ||| |||||| || | ||| |||||| || Sbjct 5406 GGAGATCATGGCACAAGTCTTG-AGGGTGTCGTAGATTCCCTCAATGCTGTCGTCCTTCA 5348 Query 205518 GTGTC-ACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGCGTG 205576 | || ||||| |||| || | || || || ||||| |||| ||| ||||| Sbjct 5347 -TATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTC 5289 Query 205577 GGGCTGGCGTGGCTGAAG 205594 ||| |||||| ||||| Sbjct 5288 GGGGAGGCGTGTGTGAAG 5271 >seq4862 Length=8819 Score = 141 bits (156), Expect = 1e-28 Identities = 332/498 (67%), Gaps = 11/498 (2%) Strand=Plus/Minus Query 159650 TTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTTC 159709 |||||||| |||||||||||||| | | || || ||||| || |||||||||| Sbjct 7594 TTCTCGAAGAAGTTGGTCTTGCCGCCGAGTGAGATGTTCTCCATAAAATCGAATGGGTTG 7535 Query 159710 TTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTCG 159769 | | | ||| |||| ||| || || | || | ||||| || ||||| || Sbjct 7534 GTGGCACGGTAGACCTTCTCGTTTCCCAGGGCGACAAGAAGTCTGTCAGCGACAAACTCA 7475 Query 159770 ATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCGA 159828 ||||| || | |||| | | ||| || ||||| || ||| | ||| |||| Sbjct 7474 ATGTA-CTGCTTCATCAGGTTGGCGTTCATGCCCAGGAGGGCGCAGGGCAACGCCTCCGT 7416 Query 159829 CAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCC 159888 |||||||| | |||||||| ||| || ||| ||||||| | ||| || | Sbjct 7415 AAGAAACTCTTGCTCAATCTTGACAGCATCGACAACAATCTCCTTCACAACCTCCTTGTT 7356 Query 159889 CGGCTTGCCCAAAATGT---GGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 ||| || ||| || | |||||||| || ||||||||| ||| || || Sbjct 7355 GGGCCTGT------TGTTCAGGAGCGAGAACAGGAGACAGGCAAAGTCGGTGTGTAGACC 7302 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 ||| || || ||||||| ||||||||| | | || || ||||| | |||||| || Sbjct 7301 CTCATCACGCGAGATGAGCTCGTTGGAGAAAGTCAGACCAGGCATCAGGCCACGCTTCTT 7242 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 |||||| || |||| |||||||||||||| || ||||| ||||| ||| | || || || Sbjct 7241 GAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAGAAGATACCCTCGACGACAGCGAAAGC 7182 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 | || | | |||| | | || |||| | ||||||| ||||| || || Sbjct 7181 GATCAGGCGCGTGGCAAAGGTTGACTTCTTGTCGGTGATCCACCTCAGAGCCCAGTCGGC 7122 Query 160126 CTTCTTTGCGATGCACGG 160143 |||||| |||||| || Sbjct 7121 CTTCTTGCGGATGCAGGG 7104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795069780452640