Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734675.1_202014-07-28] 8,535 sequences; 35,946,122 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq4608 125 7e-24 seq2184 125 7e-24 seq6263 105 6e-18 >seq4608 Length=4661 Score = 125 bits (138), Expect = 7e-24 Identities = 405/618 (66%), Gaps = 13/618 (2%) Strand=Plus/Minus Query 145869 CCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCG 145928 |||| ||| | ||||||||| || | ||||| || |||| ||| || ||||||| | Sbjct 2235 CCTCGAACTCTTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGG 2176 Query 145929 ACCATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACA 145988 ||| ||||||| | ||||||| ||| |||| ||| || | ||| || ||| | Sbjct 2175 TCCAGTCGCCGTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGA 2116 Query 145989 TCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACTAT 146048 || ||| || || ||||| || ||| | | | | || | ||| Sbjct 2115 ACAGGTCACGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGA-ACTCG 2057 Query 146049 A-GATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCA 146104 | || || ||||||||||| |||| |||| ||| | ||| || || ||| ||| Sbjct 2056 AAGACATCTGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCA 1997 Query 146105 CCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTG 146164 |||||||| |||| || | ||||||| || || |||| |||||| | | |||| | Sbjct 1996 CCCTGGTCGACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTC 1937 Query 146165 GCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACG 146224 | |||||| ||| | || || ||| || || | || ||| || || | Sbjct 1936 GAGGTGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCACGGATGCGATGGACGTTGAGA 1877 Query 146225 CCGAGACCGCC-GCCGTACTTGGATATAGCGGCGC-AGTCGCCGAGCGTCTCGTAGATGC 146282 |||| |||||| ||| | |||||| || ||| | |||| ||| || |||||||| | Sbjct 1876 CCGATACCGCCAGCCAT-CTTGGAGATCATGGCACAAGTC-TTGAGGGTGTCGTAGATTC 1819 Query 146283 CGTCAATGCTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGG 146340 | |||||||| ||| |||| || | | ||| ||||| || ||| ||| ||| ||| Sbjct 1818 CCTCAATGCTGTCGTCCTTC--ATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGG 1761 Query 146341 CGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCG 146400 || || || ||| | ||||||| ||||| || || | ||| | ||| | Sbjct 1760 TGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAAGGTT 1701 Query 146401 ATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAG 146460 || |||||||| | | ||||| ||| || || || | ||| || ||||||| Sbjct 1700 GTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCAGATACCTACAGCAACACGCATGAT 1641 Query 146461 CATGTGTTGGGGCCGCTC 146478 |||||| || |||| ||| Sbjct 1640 CATGTGCTGTGGCCTCTC 1623 Score = 105 bits (116), Expect = 6e-18 Identities = 159/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| ||||| ||||||||||| | |||||| || || | ||| || || |||| Sbjct 3046 TTGACTACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGC 2987 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 ||||| ||||||| ||||| |||||||| | || | || || |||||| || || Sbjct 2986 TCAAAGCACTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACG 2927 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | || ||||| | || || | |||||||| |||| || | |||| ||||| Sbjct 2926 AGCAAGCTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCAG 2867 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT 145283 || | ||| | |||| ||||||||||||||| | ||| |||| Sbjct 2866 AGGTCTGAAGGCTTGACGTTCCACATGTCGTACTGGAGAATTCCCT 2821 >seq2184 Length=15654 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||||||| | || | ||| |||||| || |||||||| ||| | Sbjct 12092 CCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 12033 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | |||||| ||||||||||| || |||| || |||||||||||||| ||| Sbjct 12032 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGG 11973 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || ||| | ||||| | Sbjct 11972 ATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACC 11913 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236 || | ||| | || || || || || || || ||||| |||||||||| Sbjct 11912 TCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 11864 >seq6263 Length=8206 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || || || | || || |||||||| |||||||| ||| | Sbjct 3598 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 3657 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| | |||||| || ||| |||| | ||||| ||||||||||| Sbjct 3658 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 3717 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || || | | || | || || | ||||||| Sbjct 3718 ATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACC 3777 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || || || | ||| || ||||| ||||||||| Sbjct 3778 TCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 3825 Score = 102 bits (112), Expect = 8e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || ||||| | ||| ||||||||| |||||||| ||| Sbjct 3825 GCCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGA 3884 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || |||||| |||||||| || ||| | || | || || ||||||||||| Sbjct 3885 AAGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGG 3944 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| ||| ||||| | || | |||||| | ||||| | Sbjct 3945 AATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCAC 4004 Query 131187 GTCGACGGTAACGGTTTTACCGGT 131210 |||| ||| | ||| || || || Sbjct 4005 CTCGAGGGTGATGGTCTTGCCAGT 4028 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| ||||| | || | ||||||||||| ||||| |||||||| | Sbjct 3370 CCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGAC 3429 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | ||||| ||||||||||| || |||| ||||| || ||||| || ||| Sbjct 3430 AGGGTTCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGG 3489 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| | | || |||| | || | || || | || || | Sbjct 3490 ATACCCTCCTTGTC-TTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAAC 3548 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | |||||| ||||| || || || ||||| || ||||| Sbjct 3549 TTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 3596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471962442134400