Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734675.1_202014-07-28] 8,535 sequences; 35,946,122 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq2247 120 3e-22 seq6263 114 1e-20 seq2184 84.2 2e-11 >seq2247 Length=8784 Score = 120 bits (132), Expect = 3e-22 Identities = 342/522 (66%), Gaps = 29/522 (6%) Strand=Plus/Plus Query 47070 CCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAAAACGTCACT 47129 |||||| | |||| |||||||| ||||| ||| || || || | || |||| Sbjct 7106 CCCTGCATCCGCAAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAA-GTCAAC 7164 Query 47130 CTG-GCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTT 47188 || ||| || ||||||||||||| |||||||||| |||||||| || || Sbjct 7165 CTTTGCCACGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTT 7224 Query 47189 TGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGA 47248 ||| | || || | | || | || | ||||| || || || || |||||| Sbjct 7225 TGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGA 7284 Query 47249 GCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCTACTAC-------- 47300 ||| |||||| | || || || || |||||| |||||||||||||| | | Sbjct 7285 GCTCATCTCGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCTGTTCTCGCTCCT 7344 Query 47301 -AACACTAGAGTCGATCAAAAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGC 47359 |||| || | | | ||| ||| || || | || || ||| ||| || Sbjct 7345 GAACAACAG-GCCCAACAA-----GGAGGTT------GTGAAGGAGATTGTTGTCGATGC 7392 Query 47360 CGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAA 47419 ||| |||||| |||||| | | ||||| ||||| | | |||| ||||| Sbjct 7393 TGTCAAGATTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGCGCCCTCCTGGGCATGAA 7452 Query 47420 CGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGTTCAGCT--- 47476 ||| | |||||| ||||||| || |||||||| ||| | || || || || Sbjct 7453 CGCCAACCTGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTCGCCCTGGG 7512 Query 47477 AAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCT 47536 ||| | ||| | |||| || || |||||||| |||||| | ||||| || || Sbjct 7513 AAACGAG---AAGGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATCTCACT 7569 Query 47537 CGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 || |||||||||||||| |||||||| ||||| ||||| || Sbjct 7570 CGGCGGCAAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTA 7611 >seq6263 Length=8206 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| ||||| || | ||||| || ||||| || ||||| ||| | Sbjct 3598 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 3657 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| || | ||| ||||||||| |||||| |||||| || || ||||| Sbjct 3658 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 3717 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||||||||| ||| || || | | || | ||||| | | |||||| Sbjct 3718 ATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACC 3777 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | || | || ||||| |||| ||| || || || ||||||||| Sbjct 3778 TCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 3825 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| || |||||||||||||| || || | ||| || ||||| || || Sbjct 3400 GTCGACTCCTTCTGAATATTGTAATCAGACAGGGTTCTTCCATCCTCCAGCTGCTTGCCC 3459 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTG-CTT 127035 || ||||||| || || || || || || || |||||||||| | ||| | | || || Sbjct 3460 GCAAAGATCAAACGTTGTTGGTCAGGCGGGATACCCTCCTTGT-CTTGAATCTTTGATTT 3518 Query 127036 GA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAG 127094 || |||| |||| ||||| | | || ||||||| || | ||||||||||| || | Sbjct 3519 GACGTTG-TCGATTGTGTCTGAAGATTCAACTTCGAGTGTGATGGTTTTGCCGGTAAGCG 3577 Query 127095 TTTTTACAAAAATCTGCAT 127113 | || || || || ||||| Sbjct 3578 TCTTGACGAAGATTTGCAT 3596 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||||| | || ||| ||||| || ||||| ||| Sbjct 3826 CCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 3885 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| || || ||||| ||||||||| | || | || || || || ||||| Sbjct 3886 AGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGA 3945 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| ||| ||||| |||| |||| ||| || || ||| || Sbjct 3946 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTG-TCGATGGTATCGCTAGACTCCAC 4004 Query 127066 TTCGACGGTCACCGTTTTGCCGGT 127089 |||| ||| | || ||||| || Sbjct 4005 CTCGAGGGTGATGGTCTTGCCAGT 4028 >seq2184 Length=15654 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || || ||||| || || || ||||||| |||||||| || || || || ||||||||| Sbjct 12020 TCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACCCTCCTTG 11961 Query 127019 TCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACC 127078 ||| ||| || ||||| | |||| |||||| | ||| || || | ||| | Sbjct 11960 TCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAGGGTGATA 11901 Query 127079 GTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || ||||| || || || || || || ||||||||| Sbjct 11900 GTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 11865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475450070008400