Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734675.1_202014-07-28] 8,535 sequences; 35,946,122 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq4608 360 4e-94 seq2247 150 3e-31 >seq4608 Length=4661 Score = 360 bits (398), Expect = 4e-94 Identities = 1230/1885 (65%), Gaps = 94/1885 (5%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || | || || |||| || || || ||||||||||||||||| Sbjct 3388 ACAGTGAACTGAATCGGCTGGGCGGCTGCCTGCGTCCGCAGGTAGTACATGCCGGTCTTG 3329 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTC 212669 || || ||| ||||||| | ||||| | |||| |||| | || || Sbjct 3328 AGACCAAGCTT---CCAGCCGGTGAAATGCATCGAGGTGA---TCTTGCCC---ATGGTC 3278 Query 212670 TGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCC 212729 |||| || || || | ||| || ||||| |||||| ||||| | | Sbjct 3277 GGGTC---------GCGCATGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCA 3227 Query 212730 CTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATT 212789 | |||||||||||| | | || | || |||| |||||| || |||||| ||| Sbjct 3226 CGGTCAGCGGCCATCTGAACGACGGTACGTTGCGAGATCTCCCAAACAGTCTTGTAGAGC 3167 Query 212790 TCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCC--CCTGTGT-ATGGTC 212846 | ||| ||||| |||| || || |||||||| | || || ||| | ||| | Sbjct 3166 TTCTTGGTATCCTCAGGGATGCTGGCAATGTTCTGGATGGAGCCTCCCTCGGCGATGATA 3107 Query 212847 AGCTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCT-CCAGGCACTTGACCAGGTG 212905 | | | |||||| || ||| || || | || |||| ||||| || Sbjct 3106 CGGTTCTT---CATGTCGTCTGACCACAGACCAA-GCTCGACCAGATCCTTGAGCAACCA 3051 Query 212906 AGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTA 212965 |||||||||| |||||| || || | ||||| | | ||||||| ||| ||||| || Sbjct 3050 GGGGTTGACTACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATA 2991 Query 212966 GGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGC 213025 |||||| | || ||||||||| || || || |||| ||||| ||||| |||||||| || Sbjct 2990 GGGCTCAAAGCACTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGC 2931 Query 213026 CACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTC 213085 || || | ||||| | || || || | |||| | | || | ||||||| Sbjct 2930 AACGAGCAAGCTGTTGCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTC 2871 Query 213086 CCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTT 213145 ||| | | || ||| ||| |||||||||||||| |||| | || || | Sbjct 2870 CCAGAGGTCTGA-AGG--------CTTGACGTTCCACATGTCGTACTGGAGAATTCCCTG 2820 Query 213146 GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGA 213205 || || |||| ||| | ||||| || || ||||||| || |||| ||| || Sbjct 2819 TGAAACAGGAGATCCCTCGTATGTCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGA 2760 Query 213206 CGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTC 213265 || ||| ||||||| ||||||||| ||||| |||| | ||||||| | ||||| Sbjct 2759 GGCAGTCAGAGCAGCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCTC 2700 Query 213266 TGGGGACGTGAAGGGCATCATCA-TGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGA 213324 || ||| ||| |||| | ||| |||| | |||||||| || ||||| || | Sbjct 2699 AGGAGACTCGAAAGGCAGACGGAGTGCAA-GGAAAGCGTCAGCCAGACCTTGGACGCCCA 2641 Query 213325 TGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTG 213383 ||||| || ||||| | || ||| ||| | || ||||| | |||||| ||||| Sbjct 2640 GACCGATAGGCCTGTGGCGCATGTTGCTGTTGCGTGC-CTCCTGGACGGGGTAGTAGTTG 2582 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGAC---ATGGGCCAGGTAC 213440 ||||||||||||||||||||||| | |||| ||||| |||| || | | Sbjct 2581 ACTTCGATGATCTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGG---AGTTTC 2525 Query 213441 TCGTGATTGAACACGTAGCCCCCGTCCTGC------ACAAACTCAGGCAGGGCGATGCTG 213494 || || |||| | || | || || |||| ||||| || | | Sbjct 2524 TCA------AAGTCGTATTCACCCTTGTGGTAGTCGACGAACTGGGGCAGAGCCAGGGAA 2471 Query 213495 GCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGG 213554 || |||||||| || || ||||| | || | | | |||||| || ||||| ||||| ||| Sbjct 2470 GCAAGGTTGCATACAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGG 2411 Query 213555 TTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTT 213613 ||| || || ||||| || ||||||| ||||| ||| ||| | |||| |||||| Sbjct 2410 TTGGAGCTGCGAATGGTACCAAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGTGATCCTT 2352 Query 213614 GTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTA 213673 ||| |||||| | ||| || ||||| ||| | | |||| || ||| || | Sbjct 2351 GTACAGCATGAACGGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAATACCAAAGTTT 2292 Query 213674 CCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTC 213733 | |||||||| | | | ||| | | ||| | ||| |||| || || || | Sbjct 2291 CTGGGCCTTGATCGTCTTGC-GACCCTTACCGGCCTG--CTCATACTTCTCATACAGAGC 2235 Query 213734 GTTGAATTCGTGGCCCCAGACCCTGTCC---AGTCCCGGACAGGA-TGCGGGACACATGA 213789 | ||| || | || || | |||| || || || || | |||| ||||| | Sbjct 2234 CTCGAACTCTTCACCGTAG---CAGTCCGCGAGGCCAGGGCACTCGTTCGGG-CACATCA 2179 Query 213790 GGCTCCAGTCCCCGTCATCTCTGA-CTCTCTGCATGAACAGGTCCGGGACCCACAGCGCG 213848 | ||||||| |||| | ||| | | | || ||||||||| || |||| ||| || ||| Sbjct 2178 AGGTCCAGTCGCCGTTTT-TCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCG 2120 Query 213849 GTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAG 213908 ||||||||| | || | |||| ||| ||| ||| || | || || || || Sbjct 2119 AGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAAC 2060 Query 213909 TCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTG 213965 || |||| || |||||||||||||| | ||||||||||||||| || | || | ||| Sbjct 2059 TCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTG 2000 Query 213966 CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCG 214025 || |||||||| || | || ||||||| | ||||| | ||| || | ||| Sbjct 1999 CCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCG 1940 Query 214026 TTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGA- 214084 || || |||||||| || || ||||| ||||| | ||| | || ||| ||||| Sbjct 1939 TTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCAGTGGCAC---GGATGC-GATGGAC 1884 Query 214085 ---GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCAT 214141 ||| || || || || || ||||||||||||||| || | | | || || Sbjct 1883 GTTGAGACCGATACCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTA 1824 Query 214142 GATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCT 214201 ||| || | |||||||| || | | | | || |||||| ||| | || | |||| Sbjct 1823 GATTCCCTCAATGCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACT-GAGCCT 1765 Query 214202 G-GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGA 214260 | | | ||| | |||||||||||| ||| ||| || | | || ||| |||| | | Sbjct 1764 GCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAA 1705 Query 214261 GCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCA 214320 | ||||||| || | |||| |||| || ||| || ||| | || Sbjct 1704 GGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCCAGATACCTACAGCAACACGCA 1645 Query 214321 TCAGCATGTGCTGGGGCCTCT---CTATGGGTCCTTTGGGGCCCTTGAGCAGGTAGGAGC 214377 | | ||||||||| ||||||| | || || ||| | ||| | ||||| || | Sbjct 1644 TGATCATGTGCTGTGGCCTCTCGACAATCTTGCCATTGAG---CTTCAATAGGTAAGACC 1588 Query 214378 GCTCCAGAGTCTTGAACCCAAAGTA 214402 ||| ||||||||||| || || || Sbjct 1587 TCTCGAGAGTCTTGAAGCCGAAATA 1563 >seq2247 Length=8784 Score = 150 bits (166), Expect = 3e-31 Identities = 345/518 (67%), Gaps = 15/518 (3%) Strand=Plus/Minus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 ||||| || || || | ||||| |||||||| ||||| || | | |||||||||||| Sbjct 7614 TGGTACTCGCCAACGCGTTTCTCGAAGAAGTTGGTCTTGCCGCCGAGTGAGATGTTCTCC 7555 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACC----CGTGTC--AGGCCCATCTGTTCC 47953 || || ||| ||||||| | || ||| ||| || ||| | | | Sbjct 7554 ATAAAATCGAATGGGTTGGTGGCACGGTAGACCTTCTCGTTTCCCAGGGCGA------CA 7501 Query 47954 AGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 || || || ||||| |||| ||||| | ||| ||| || ||||||||| | | Sbjct 7500 AGAAGTCTGTCAGCGACAAACTCAATGTACTGCTTCATCAGGTTGGCGTTCATGCCCAGG 7441 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 |||| |||||| |||| || |||||||| | ||| |||| || || || | ||| Sbjct 7440 AGGGCGCAGGGCAACGCCTCCGTAAGAAACTCTTGCTCAATCTTGACAGCATCGACAACA 7381 Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 |||| ||| || || ||| ||||| |||| || | | || | ||| Sbjct 7380 ATCTCCTTCACAACCTCCTTGTTGGGCCTGTTGTTCAGGAGCGAGA---ACAGGAGACAG 7324 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 |||||||| |||| | || || || || ||||||| |||||||||| |||||| Sbjct 7323 GCAAAGTCGGTGTGTAGACCCTCATCACGCGAGATGAGCTCGTTGGAGAAAGTCAGACCA 7264 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 ||||| | || | || ||||||||||| || | || |||| || ||||||||| Sbjct 7263 GGCATCAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCAAAAGCACCGCTGAAGAAGATA 7204 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || | ||||| ||| | || | | | || | | |||||||| | |||| Sbjct 7203 CCCTCGACGACAGCGAAAGCGATCAGGCGCGTGGCAAAGGTTGACTTCTTGTCGGTGATC 7144 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 || || |||||||| |||||||| |||||| || Sbjct 7143 CACCTCAGAGCCCAGTCGGCCTTCTTGCGGATGCAGGG 7106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931433417094400