Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734675.1_202014-07-28] 8,535 sequences; 35,946,122 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq6263 163 3e-35 seq4608 158 1e-33 seq2184 104 2e-17 >seq6263 Length=8206 Score = 163 bits (180), Expect = 3e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || ||||| ||||| ||||| || || |||||||| ||| | | Sbjct 3596 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 3537 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || ||| |||||| |||||||| || || || || || || ||| Sbjct 3536 GACACAATCGACAACGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAA 3477 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||||||||| || || |||||||||||| |||| | |||| ||||| || Sbjct 3476 CAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGAAGAACCCTGTCTGATTACAAT 3417 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| ||||| ||||| || ||| | ||| Sbjct 3416 ATTCAGAAGGAGTCGACTCTGCACCTTGTG 3387 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || ||| | || || || | | Sbjct 3824 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 3765 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||||||||| || || || ||||| || ||| Sbjct 3764 GACACGATTGACAATGTTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAA 3705 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| || || || ||| |||||||| | | |||| || || ||| Sbjct 3704 CAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAAC 3645 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||||||||| || || |||||||| |||| |||| || || Sbjct 3644 ATCCAAAAGGAATCTACTCTGCACTTGGTCCTGCGTCTGCGTGGTGG 3598 >seq4608 Length=4661 Score = 158 bits (174), Expect = 1e-33 Identities = 959/1524 (63%), Gaps = 56/1524 (4%) Strand=Plus/Minus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| || || ||||| | || || || |||||||||| || | |||||||| Sbjct 3040 ACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAG 2981 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 | |||||||| || || || || | |||| | || || |||||| || || | | Sbjct 2980 CACTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAG 2921 Query 138628 GAATTCCGTAAACCGTGAAGCTTGATTCGTT--CCTTGAGCGACGACCAGTCCCACAAAT 138685 || || | ||| || ||||||| ||| ||||||| | ||||||||| | | Sbjct 2920 CTGTTGCGGACACCATGTTGCTTGAT--GTTGGCCTTGAGAGCGTCCCAGTCCCAGAGGT 2863 Query 138686 CGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCC----AAACTTGCGGGACTG 138741 | ||| || ||||||||| |||||||| | |||||| |||| ||| Sbjct 2862 CTGAAGGCTTGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACA----GGAGAT 2807 Query 138742 CCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCA 138801 || ||||| | |||| ||| ||| | || | || | || || ||| Sbjct 2806 CCCTCGTATGTCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGAGGCAGTCAGAGCA 2747 Query 138802 CCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTAC 138861 | | ||| || || || |||| || ||||| || ||||| | |||| | Sbjct 2746 GCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCTCAGGAGACTCGAAA 2687 Query 138862 GGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGA 138921 |||| ||||| ||| ||||| ||||| ||||| ||||||| |||| ||| | Sbjct 2686 GGCAGACGGAGTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCGATAGGCCTG 2627 Query 138922 TGGCGCAGATTTGACGCTTTTGCG-GCTTC---GATAGGATAATAGTTTACATCGATGAT 138977 ||||||| || ||| ||||| || || || || || ||||| || |||||||| Sbjct 2626 TGGCGCATGTT----GCTGTTGCGTGCCTCCTGGACGGGGTAGTAGTTGACTTCGATGAT 2571 Query 138978 TTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGT 139037 ||||| | || || || || || | ||| | | | | ||||| |||||| Sbjct 2570 CTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTCGTATTC 2511 Query 139038 GCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCA 139097 ||| || || |||||||| | | | || || || || | |||||| Sbjct 2510 ACCCTTGTGGTAGTCGACGAACTGGGGCA-------GAGCCAGG--GAAGCAAGGTTGCA 2460 Query 139098 CACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTT 139157 || || || ||||| ||| | ||| |||| ||| || | || | || | Sbjct 2459 TACAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCG 2400 Query 139158 GATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATA 139217 || ||||| | || | || ||||| || ||||| || ||| ||||| ||||| | Sbjct 2399 AATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAA 2340 Query 139218 CGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAG--CTTGT 139275 ||| | ||||| || || | ||| | ||| | | | |||| || | |||| Sbjct 2339 CGGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAATACCA-AAGTTTCTGGGCCTTG- 2282 Query 139276 AT----TTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCG 139331 || ||| | | || || | |||| ||||| || || || | ||||| Sbjct 2281 ATCGTCTTGCGACCCTTAC----CGGCCTGCTCATACTTCTCATACAGAGCCTCGAACTC 2226 Query 139332 TTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCC 139391 |||||||||| ||| | || | | |||| || || ||||| | | ||| |||| Sbjct 2225 TTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCC 2166 Query 139392 GTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCG 139451 ||| || |||||| ||||||||||||| || ||||| | ||||| | || || || Sbjct 2165 GTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACG 2106 Query 139452 CGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGC 139511 || | || ||| || ||| | | || ||||| || || || || || Sbjct 2105 GGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGC 2046 Query 139512 GTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGAC 139568 |||||| || || || |||||||| | || || || ||| ||||| || ||||| Sbjct 2045 GTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGAC 1986 Query 139569 GTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTT 139628 || || | | || ||||| || |||| ||| || | | ||| ||| || ||||| Sbjct 1985 GTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTT 1926 Query 139629 GGTGCTACGG----ATGGGA-CTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATT 139683 ||| | ||| || ||| | || || |||| | ||| || |||| ||||| Sbjct 1925 GGTAC--CGGCGATATAGGAGCCAGTG---GCACGGATGCGATGGACGTTGAGACCGATA 1871 Query 139684 CCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATATACCTCTTAT 139742 ||||| | | ||||| || | | ||| || | | || ||||| || || || Sbjct 1870 CCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTG-AGGGTGTCGTAGATTCCCTCAAT 1812 Query 139743 GCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGC 139802 ||||||||||| ||| ||||| ||||||||||| | || | | |||||||| Sbjct 1811 GCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGC 1752 Query 139803 TGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTC 139862 || || || || ||||| ||||| | || | ||||| | | ||| ||||| Sbjct 1751 GTTGAAAAGCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAAGGTTGTAGGTTTC 1692 Query 139863 GATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTG 139922 |||| | | | |||| | || |||||| |||| || ||||| | ||| || || Sbjct 1691 GATGACTCGCTCAATGTTGTCACCCCAGATACCTACAGCAACACGCATGATCATGTGCTG 1632 Query 139923 GATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTA 139982 || ||| | | | ||| | || || || ||| |||| || |||||| | Sbjct 1631 TGGCCTCTCGACAATCTTGCCATTGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAA 1572 Query 139983 GCCAAAGTACCTATAGTTGAAATC 140006 ||| || || ||||||||||| Sbjct 1571 GCCGAAATATTGGTAGTTGAAATC 1548 >seq2184 Length=15654 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| || || || || || | | | Sbjct 11866 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 11925 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 11926 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 11985 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||||||| || ||||| ||||| || | | |||| || || ||| Sbjct 11986 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 12045 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 || || ||||| || || ||| | ||| |||| |||| || || || Sbjct 12046 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGGTGG 12095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449849601549800