Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734675.1_202014-07-28] 8,535 sequences; 35,946,122 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2184 114 8e-21 seq6263 104 2e-17 seq6923 82.4 5e-11 >seq2184 Length=15654 Score = 114 bits (126), Expect = 8e-21 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | || ||| | ||| | || || |||||||| || || |||||||| |||| Sbjct 12094 CACCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGG 12035 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || || | |||| || | || || |||||||| ||||| |||||||| || | | Sbjct 12034 ACAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGG 11975 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||| || ||||| || || || | ||| ||| | ||||||||| || ||| Sbjct 11974 GGATACCCTCCTTGTCCTGGATCTTGGACTTGA-CATTGTCGATGGTGTCGCTCGACTCC 11916 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| ||||| || || || || | || || || ||||||||||| Sbjct 11915 ACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 11866 >seq6263 Length=8206 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | ||||| || ||||| || ||||| |||||||| ||||| Sbjct 3597 ACCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 3656 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || |||||| | || ||||| || ||||| || || |||| ||||| || || | || Sbjct 3657 CAGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGG 3716 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700 | ||| || ||||| || || ||| ||||| |||| ||||| || || | Sbjct 3717 AATACCCTCCTTGTCTTGGATCTTGGATTT-AACATTGTCAATCGTGTCTGAAGACTCGA 3775 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | |||||| || || || || || || || || ||||||||||| Sbjct 3776 CCTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 3824 >seq6923 Length=256 Score = 82.4 bits (90), Expect = 5e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||||| || || |||||||| ||||| ||||| || |||| || | ||| Sbjct 133 TGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAAAGTGTCCGACCGTCCTCGAGTTGC 192 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 || ||||||||||| | |||||| || || | || | ||| || ||||| Sbjct 193 TTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGGATACCCTCCTTGTC 242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328669808107200