Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734675.1_202014-07-28] 8,535 sequences; 35,946,122 total letters Query= NC_027348.1 Length=73990 Score E Sequences producing significant alignments: (Bits) Value seq1562 86.0 3e-12 >seq1562 Length=7607 Score = 86.0 bits (94), Expect = 3e-12 Identities = 78/98 (80%), Gaps = 3/98 (3%) Strand=Plus/Plus Query 21954 CTGCAAACTCTATCAGCGCAGCGCTGACATGTTCCTGGGCGTGCCCTTCAACATCGCCAG 22013 |||| | ||||| ||||| | |||||| ||| ||||||||||||||||| ||||| Sbjct 1163 CTGCCAGCTCTACCAGCGGTCCTGCGACATGGGCCTAGGCGTGCCCTTCAACATTGCCAG 1222 Query 22014 CTACGCGCTGCTGACGCACCTCATGGCG---GCCACGG 22048 |||||| |||||||||||| | || ||| ||||||| Sbjct 1223 CTACGCACTGCTGACGCACATGATTGCGCGTGCCACGG 1260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236618584300385