Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734675.1_202014-07-28] 8,535 sequences; 35,946,122 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq4608 105 2e-17 seq2247 105 2e-17 >seq4608 Length=4661 Score = 105 bits (116), Expect = 2e-17 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030 ||||||| | || ||| | ||||||||||||||| |||||||||||||| || || || Sbjct 1940 CGGCATTGTTCCCATGCTGCGTGTGTTCAACAACACAGCTCGCTACGTCGACCAGGGTGG 1999 Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA 255081 | ||| ||||| || || || |||||||||| |||||||||||||| || Sbjct 2000 CAACAAGCGCCCCGGTGCCTTTGCCATCTACCTTGAGCCGTGGCACGCAGA 2050 >seq2247 Length=8784 Score = 105 bits (116), Expect = 2e-17 Identities = 120/160 (75%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 443708 GCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCA 443767 ||| || ||||||| ||||| ||||| || | || || ||||| ||||| ||||||| Sbjct 7174 GCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGT-GCTTTTGCCTCCA 7232 Query 443768 TCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCA 443827 |||||||| | || |||||||| || |||| |||||||| || ||||| || ||| Sbjct 7233 TCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCTGACTTTCTCCAACGAGCTCATCT 7292 Query 443828 GTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867 || || |||||| | || |||||| |||||||| || Sbjct 7293 CGCGTGATGAGGGTCTACACACCGACTTTGCCTGTCTCCT 7332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588162308013075