Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734675.1_202014-07-28] 8,535 sequences; 35,946,122 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq6263 86.0 4e-12 >seq6263 Length=8206 Score = 86.0 bits (94), Expect = 4e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || ||| |||| ||| || ||||| | ||||| || ||||| || | || Sbjct 3959 GACAAGGAGGGTATTCCTCCGGACCAACAACGCCTTATTTTCGCTGGAAAGCAGCTTGAG 3900 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| || | | | ||||| |||||||||||||| |||||||| | |||||||| | Sbjct 3899 GACGGTCGGACCCTTTCCGACTACAACATCCAAAAGGAGAGCACCCTCCATTTGGTCCTT 3840 Query 28003 CGTTTGCGTGGCGGC 28017 ||| | ||||| ||| Sbjct 3839 CGTCTCCGTGGTGGC 3825 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || ||| |||| ||| || || || | || || || ||||| || ||||| Sbjct 3731 GACAAGGAGGGTATTCCTCCGGACCAACAGCGACTGATCTTCGCTGGAAAGCAGTTGGAG 3672 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | ||||| ||||||| |||||||||||||| || ||| |||| ||||| || Sbjct 3671 GATGGACGCACGCTGTCCGACTACAACATCCAAAAGGAATCTACTCTGCACTTGGTCCTG 3612 Query 28003 CGTTTGCGTGGCGG 28016 ||| ||||||| || Sbjct 3611 CGTCTGCGTGGTGG 3598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355825383081945