Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734675.1_202014-07-28] 8,535 sequences; 35,946,122 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq6263 179 9e-40 seq2184 122 2e-22 seq19 109 1e-18 >seq6263 Length=8206 Score = 179 bits (198), Expect = 9e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | |||||| | ||| ||||| ||||| ||||||| ||||| |||| || || Sbjct 3603 ACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAGCGT 3662 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || | |||||| ||||||||||| ||||| |||||||| || |||||||| Sbjct 3663 GCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGAATACC 3722 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| || ||| || || |||||||| | || || || || Sbjct 3723 CTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGACCTCCAA 3782 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| ||||||||||||||||| || | ||| | ||||| Sbjct 3783 CGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 3824 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| ||||| || || || || | ||||||||| | || || Sbjct 3375 ACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGACAGGGT 3434 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||| ||||| || |||||||| || || ||||| | ||||||||||| ||||| ||||| Sbjct 3435 TCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGGATACC 3494 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||| |||||| || || ||||| |||||||| | ||| || || | Sbjct 3495 CTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAACTTCGAG 3554 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || ||||| || | || || | ||| | |||||| Sbjct 3555 TGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 3596 Score = 118 bits (130), Expect = 3e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | ||||| ||| || ||||||| ||||| |||| | || | || || Sbjct 3841 AGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGGGTCCGACCGTCC 3900 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| |||||||| ||||| ||||||||||| || |||||||| |||||||| Sbjct 3901 TCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCC 3960 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || |||||||| || | ||||| || | ||||| ||| Sbjct 3961 TGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTC 4020 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 4021 TTGCCAGT 4028 >seq2184 Length=15654 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || |||||||| ||| || || |||| ||||| |||| || || Sbjct 12087 ACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGT 12028 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || || || |||||||| || || ||||| | || || ||||| || || ||||| Sbjct 12027 CCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGGATACC 11968 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||||||||| | ||||| || | Sbjct 11967 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCACCTCAAG 11908 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||||||||| | || || | ||| | ||||| Sbjct 11907 GGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 11866 >seq19 Length=2763 Score = 109 bits (120), Expect = 1e-18 Identities = 193/276 (70%), Gaps = 9/276 (3%) Strand=Plus/Plus Query 7446 ATATTTAATATTTGGTGGCTTTTCTGGTATTAT-AGGTACTATATTTTCTATGATTATAA 7504 |||||||||||||| | ||||| || ||||| ||||||| ||||| | | |||| Sbjct 1150 ATATTTAATATTTGCTCTATTTTCCGG-ATTATTAGGTACTGCGTTTTCAGTACTGATAA 1208 Query 7505 GGTTAGAATTAGCTGCTCC--GGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAA 7562 | | || || || || |||| | ||||| || || ||| ||| | || || Sbjct 1209 GAATGGAGCTAAGTGGACCAGGGGTAC---AATATATAGCGG--ATAATCAATTATATAA 1263 Query 7563 CGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGAT 7622 ||| || || || || || | | |||||||| || | |||||||| | | | || Sbjct 1264 TAGTATAATAACAGCTCACGCTATATTAATGATTTTTTTCATGGTTATGCCAGCTTTAAT 1323 Query 7623 AGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCC 7682 ||| ||||| || |||| || | ||||||||||| || | ||||||||||| || || Sbjct 1324 AGGTGGTTTTGGTAATTTCTTAATGCCTTTAATGATAGGAGGGCCTGATATGGCATTCCC 1383 Query 7683 AAGGCTTAACAATATAAGTTTTTGATTACTACCGCC 7718 || || || ||||| |||||||||||| | || || Sbjct 1384 TAGACTAAATAATATTAGTTTTTGATTATTCCCCCC 1419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192400791123290