Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734675.1_202014-07-28] 8,535 sequences; 35,946,122 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq6263 190 4e-43 seq2184 159 7e-34 seq5800 134 3e-26 seq6923 118 2e-21 seq334 113 9e-20 seq2247 86.0 1e-11 >seq6263 Length=8206 Score = 190 bits (210), Expect = 4e-43 Identities = 179/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || |||| || | || ||| ||||||||||||||||| | Sbjct 3597 ACCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGA 3656 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 |||||||| |||||||| | || || || || ||||||| || |||||||| || Sbjct 3657 CAGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGG 3716 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||||||||||||| | ||| || | || || ||||| |||| ||||| Sbjct 3717 AATACCCTCCTTGTCTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGAC 3776 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||||| ||||| |||||||||||||| ||||| |||||||| Sbjct 3777 CTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCAT 3824 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || || || || | || || || || || ||||| |||| Sbjct 3369 ACCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGA 3428 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | |||||||| || || || || |||||||||||||||||||||||| ||| Sbjct 3429 CAGGGTTCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGG 3488 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||||||||| ||||||| ||| ||| | ||||| ||||| |||| ||| || Sbjct 3489 GATACCCTCCTTGTCTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAAC 3548 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||| ||||| || || || || | ||||| ||||| || ||||| Sbjct 3549 TTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 3596 Score = 145 bits (160), Expect = 2e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || ||||| |||| ||| | ||||| || ||||||||||||||||| | | Sbjct 3826 CCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 3885 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || ||||| || || || || || || || | ||||||||||| ||| Sbjct 3886 AGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGGA 3945 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 |||||||||||||| |||||||| | || ||| | ||||| || || || || || Sbjct 3946 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTAGACTCCACC 4005 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 ||||| ||||| ||||| || || Sbjct 4006 TCGAGGGTGATGGTCTTGCCAGT 4028 >seq2184 Length=15654 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | ||||| || || |||||||||||||| | Sbjct 12093 ACCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGA 12034 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || | ||| ||||| || || || |||||||||||||| || || ||||| || Sbjct 12033 CAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGG 11974 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || || | ||||| ||||| | || || Sbjct 11973 GATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGCTCGACTCCAC 11914 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| ||||| | ||||| ||||| |||||||| Sbjct 11913 CTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 11866 >seq5800 Length=12227 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || || ||||| ||||| | || || || |||||||| Sbjct 5836 TTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGATA 5777 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| ||||||||| ||||| ||||||||||| || ||||| | || || | ||| Sbjct 5776 AGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCCTGAATCTTGGACTTCACATTGTCG 5717 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || |||||||| | ||||| || | ||||| ||||| || |||| |||||| ||||| Sbjct 5716 ATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCACGAA 5658 >seq6923 Length=256 Score = 118 bits (130), Expect = 2e-21 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| || || || || | || || || || |||||||||||||| | | Sbjct 109 CCACCACGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGAA 168 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || ||||| ||||| || |||||||| || | ||| |||||||| || Sbjct 169 AGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGGG 228 Query 282993 ATACCCTCCTTGTCTTGGATCTT 283015 |||||||||||||| |||||||| Sbjct 229 ATACCCTCCTTGTCCTGGATCTT 251 >seq334 Length=15108 Score = 113 bits (124), Expect = 9e-20 Identities = 138/186 (74%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 315651 GTGACTAATCACCACCACCCCACCTCCGAAATTCTTAAGCGCCTCTGCCATGGCACCGAG 315710 |||| |||| | | || ||||| |||| ||||| ||||||| | || ||||||||| Sbjct 11859 GTGAGTAATGATGATGACACCACCCTCGAACTTCTTGAGCGCCTTGGACAGGGCACCGAG 11800 Query 315711 ACTCTCGCGGTCCACAAAGTTGGTCGGCTCATCAAGAACGATGACGTGGGGTTGTTGCCA 315770 | || ||||||| ||||||| ||||||||||||||||| | ||| || | ||||| Sbjct 11799 AGAGTCACGGTCCAAGTAGTTGGTAGGCTCATCAAGAACGATCAAGTGAGGACGCTGCCA 11740 Query 315771 TAGAGC-GGCGCCGATAACGAGCTTTAGTTTTTGCCCACCAGACAGTCCACGGATGCGAG 315829 |||| |||| | | |||| ||| | || ||||||||||| ||||| ||||| | Sbjct 11739 -CGAGCAGGCGGCAAGGACGACCTTGACACGCTGTCCACCAGACAGACCACGCATGCGCG 11681 Query 315830 AATGAG 315835 | |||| Sbjct 11680 AGTGAG 11675 Score = 87.8 bits (96), Expect = 4e-12 Identities = 123/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088 ||||| || || | ||| |||| || || | ||| || || ||||| || | ||| Sbjct 10445 GGGAAACCCTCGACCTGCTCGTTGTTGATGGCGCGCATGAGGGTGGACTTTCCGGAACCG 10386 Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGA 317148 ||||||||||||||||| || || | || ||| ||| | | |||| | ||| ||| Sbjct 10385 TTGGGGCCGCAAAGACCGTAACGCTGGCCACGCTTGAGACGGAGATGGGTCTGGTTGAGA 10326 Query 317149 AGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201 |||||||| |||| || || || |||||| || | ||||||||||| || Sbjct 10325 AGAATCTTGGCACCGTAGGCGAGCGAGAACGTGCAGTTGCACAGGTCCTCACC 10273 >seq2247 Length=8784 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 230229 GGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTG 230288 |||||||| || | || ||| ||| || || || || || ||||| | || | || Sbjct 7445 GGCATGAACGCCAACCTGATGAAGCAGTACATTGAGTTTGTCGCTGACAGACTTCTTGTC 7504 Query 230289 GCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATT 230348 || || || ||||||| || || ||| ||||| |||| |||||||||| ||| Sbjct 7505 GCCCTGGGAAACGAGAAGGTCTACCGTGCCACCAACCCATTCGATTTTATGGAGAACATC 7564 Query 230349 TCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGT 230408 |||||| || || || ||||||||||| || || || |||| || |||| ||||| Sbjct 7565 TCACTCGGCGGCAAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTACCAAAAAGCCGGT 7624 Query 230409 GT 230410 || Sbjct 7625 GT 7626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046624734161890