Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734675.1_202014-07-28] 8,535 sequences; 35,946,122 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq2184 174 1e-38 seq6263 129 5e-25 seq6923 111 1e-19 seq5800 109 5e-19 seq3173 84.2 2e-11 >seq2184 Length=15654 Score = 174 bits (192), Expect = 1e-38 Identities = 180/234 (77%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || ||||| | ||| || || || |||||||||||||| ||||| ||||| Sbjct 12096 ACCACCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTC 12037 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 ||| ||||| | |||| || |||||||||||||| || |||| |||||| ||||||| Sbjct 12036 GGACAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGG 11977 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGAC 41809 ||| | | |||||||||| ||| || ||| || | || | |||||||||||| Sbjct 11976 GGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCGCTCGAC 11919 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||||| | || || || || ||||| || ||||| ||||| ||||||||| Sbjct 11918 TCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 11865 >seq6263 Length=8206 Score = 129 bits (142), Expect = 5e-25 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| ||| || ||||||||||| || ||||| |||||||| Sbjct 3825 GCCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGA 3884 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| || |||| || |||||||| || ||||| || ||||| |||||||||| || Sbjct 3885 AAGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGG 3944 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || | |||||||||| ||| || ||| ||| | | | || ||||| ||||||| Sbjct 3945 AATACCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATGGTATCGCTAGACTCCA 4003 Query 41814 CCTCCACCGTTATCGTTTTACCCGT 41838 |||| | || || || || || || Sbjct 4004 CCTCGAGGGTGATGGTCTTGCCAGT 4028 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||||| || ||||| || ||||| |||||||| Sbjct 3598 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 3657 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || | |||||| || ||||| ||||| ||||||||||||| ||| Sbjct 3658 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 3717 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||| | || | || | || ||| | | | ||||| ||||| || Sbjct 3718 ATACCCTCCTTGT-CTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGAC 3776 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| ||| || || || ||||||| ||||| ||||| ||||||||| Sbjct 3777 CTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 3825 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | ||| || ||||| || |||||||||||| || || || || Sbjct 3370 CCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGAC 3429 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || || ||||||||||| || || |||| || |||||||| | || Sbjct 3430 AGGGTTCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGG 3489 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||| | ||| | |||| || ||| | | | ||||| || || || Sbjct 3490 ATACCCTCCTTGT-CTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAAC 3548 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||| || || |||||||| ||||| || ||||| Sbjct 3549 TTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 3596 >seq6923 Length=256 Score = 111 bits (122), Expect = 1e-19 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | ||| || || || || ||||||||||| ||||| |||||||| Sbjct 108 GCCACCACGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGA 167 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || |||| ||||| ||||||||||| || || || ||||||||||||| || Sbjct 168 AAGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGG 227 Query 41755 AACGCTCTCCTTGTCCATGATTTT 41778 | | |||||||||| ||| || Sbjct 228 GATACCCTCCTTGTCCTGGATCTT 251 >seq5800 Length=12227 Score = 109 bits (120), Expect = 5e-19 Identities = 137/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||||||||| || || |||| || | ||||||||| || || | Sbjct 5838 CCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGA 5779 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGAC 41791 | || ||||||||||| | ||||| | |||||||||| ||| | || | |||| || Sbjct 5778 TAAGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCC-TGAATCTTGGACTTC-ACATT 5721 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | | ||||| ||||| ||||||| || || || || || ||||| ||||| || Sbjct 5720 GTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCAC 5661 Query 41851 GAA 41853 ||| Sbjct 5660 GAA 5658 >seq3173 Length=5637 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 85799 TCGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGT 85858 |||||||||||| || ||||| ||||| ||| ||| |||||| |||||||| || Sbjct 2117 TCGTATCGCACCCCGCTCCGGTCTCGCGGCCAAACACTTCATCGACACCGGCGCCGGCGT 2058 Query 85859 CATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGA 85912 ||| || |||||||||||||| | |||| || | | |||||||||| ||| Sbjct 2057 CATTGATGCCGACTACCGCGGTCAGGTCAAGGTCCTGTTGTTCAACCACGCCGA 2004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462254677942000