Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734685.1_202014-07-28] 8,855 sequences; 36,255,505 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq1612 257 2e-63 seq7016 205 1e-47 seq1340 143 4e-29 seq8771 136 5e-27 seq4410 131 2e-25 >seq1612 Length=16069 Score = 257 bits (284), Expect = 2e-63 Identities = 436/628 (69%), Gaps = 9/628 (1%) Strand=Plus/Minus Query 195363 AGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATA 195422 |||||||| | |||||||| || ||||| ||||| || || | ||| || || || |||| Sbjct 9886 AGATTATCGCCAATGACCAGGGTAACCGAACAACCCCGTCCTTCGTGGCGTTCACGGATA 9827 Query 195423 ATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTG 195482 || ||||| | |||||||| || || || ||| ||||||||||| ||| || | Sbjct 9826 CCGAGCGTCTGATCGGAGATGCGGCCAAGAACCAGGTCGCTATGAACCCCCACAACACCG 9767 Query 195483 TCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATA 195542 |||| ||||||||| | | |||||||||||||| || || | ||||| | ||| | Sbjct 9766 TCTTCGACGCGAAGAGGTTGATTGGTCGCAAGTTCTCCGACGCTGAGGTCCAGGCCGACA 9707 Query 195543 TAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTG 195602 | ||| ||| | | | ||| | || | || ||| |||||| | ||| | || | Sbjct 9706 TGAAGCACTTCCCCT-TCAAGGTCGTCGAGAGGT--CTGGCAAGCCTGTCATTGAGGTCG 9650 Query 195603 AATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTA 195662 | || | || ||| || || || |||| || || || || || ||||| |||| | Sbjct 9649 AGTTCAAGGGAGAGTCAAAGCAGTTCACTCCTGAGGAGATCTCATCCATGGTCTTGACCA 9590 Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722 ||||| |||||||| || |||| | | ||| || || || | || || || || | Sbjct 9589 AGATGCGTGAGACTGCTGAGTCTTACCTTGGTGGCACCGTCAACAACGCTGTCGTCACCG 9530 Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782 | || || ||||||| || || || || ||||| || ||||| || | | ||||| | Sbjct 9529 TCCCCGCCTACTTCAACGACTCGCAGCGTCAGGCTACCAAGGATGCCGGTCTCATTGCTG 9470 Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 |||| ||| || | || ||||| || || || || || || || || || ||||| | Sbjct 9469 GTCTGAACGTCCTCCGTATCATCAACGAGCCTACTGCCGCCGCCATCGCCTACGGTCTTG 9410 Query 195843 ACAAGAACAAGGACGAAGATAA---AAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899 ||||| |||| ||| | | | || || | || || ||||| ||||||||||| | Sbjct 9409 ACAAG---AAGGTCGAGGGTGAGCGCAACGTGCTTATTTTCGATCTTGGTGGTGGTACTT 9353 Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 | ||||| || || || | ||||| | ||||| ||||| || ||| | || ||||||| Sbjct 9352 TCGATGTGTCGCTCCTTACCATTGAGGAGGGTATCTTCGAGGTCAAGTCCACCGCTGGTG 9293 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGA 195987 | || || | |||||||| || || || Sbjct 9292 ACACCCACTTGGGTGGTGAGGACTTTGA 9265 Score = 233 bits (258), Expect = 3e-56 Identities = 545/820 (66%), Gaps = 3/820 (0%) Strand=Plus/Minus Query 196061 GCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCT 196120 || || ||||| || | ||||| || || ||||| || || ||||| ||||| | || Sbjct 9127 GCCCTCCGTCGTCTGCGCACTGCTTGCGAGCGTGCGAAGCGCACTCTTTCTTCCTCTGCC 9068 Query 196121 CAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACC 196180 || || | ||||| || ||| ||| || || ||||||||||| || | || || Sbjct 9067 CAGACCTCCATCGAGATCGACTCGCTGTACGAGGGTATTGACTTCTACACCTCGATCACT 9008 Query 196181 CGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAA 196240 ||||| ||||| || ||| | | || |||| | || | |||||||| Sbjct 9007 CGTGCCCGTTTCGAGGAGCTTTGCCAGGACCTGTTCCGCTCCACCCTGCAGCCTGTTGAC 8948 Query 196241 CAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGA 196300 | || | || || ||||| || ||| | ||||| | || || ||| | || || Sbjct 8947 CGTGTCTTGACCGATGCCAAGATCGACAAGGCCCAGGTTCACGAGATCGTCTTGGTCGGC 8888 Query 196301 GGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGAT 196360 || || ||||||||||| || || || | || | || |||||| || || Sbjct 8887 GGTTCCACCCGTATTCCCCGTATCCAGAAGCTCATTACCGACTACTTCAACGGCAAGGAG 8828 Query 196361 TTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCT 196420 ||||| | |||||||| || || || || || || ||||| ||||| |||||||| Sbjct 8827 CCCAACAAGTCCATCAACCCTGACGAGGCTGTCGCCTACGGTGCTGCCGTCCAGGCTGCC 8768 Query 196421 ATTCTCTCAGGTGTTGACAATAATAA--CGTCCAA-GATCTTCTGCTACTTGATGTTGCA 196477 || || || |||| || || | |||| || ||||||| || || |||||| Sbjct 8767 ATCCTTTCGGGTGACACCAGCTCCAAGTCCACCAACGAGATTCTGCTGCTCGACGTTGCA 8708 Query 196478 CCCGTATCCCTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAAC 196537 || | || || ||| | || || || |||||| | ||||| || | ||| | ||| Sbjct 8707 CCGCTCTCGCTCGGTATCGAGACTGCTGGTGGTATGATGACCAAGCTCATTCCCCGTAAC 8648 Query 196538 ACAACTATTCCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGT 196597 || || || || || ||||| | ||||| || || | || || || || || ||| Sbjct 8647 ACCACCATCCCCACCAAGAAATCCGAGGTCTTCTCCACCTTCTCGGACAACCAGCCTGGT 8588 Query 196598 GTTCATATTCAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGA 196657 || | ||| || || || || || || ||| || | ||||| ||| | || || || Sbjct 8587 GTGCTTATCCAGGTCTACGAGGGTGAGCGCCAGCGCACCAAGGACAACAACCTGCTGGGC 8528 Query 196658 ACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGC 196717 | ||||| | || || ||||| | || || | |||||||| ||||| | ||| | Sbjct 8527 AAGTTCGAGCTTACCGGCATTCCCCCGGCTCCTCGCGGTGTTCCCCAGATCGAGGTTACC 8468 Query 196718 TTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAA 196777 ||||| | ||||| || ||||| | |||||| | |||| || |||| ||||||| Sbjct 8467 TTCGACCTGGACGCCAACGGAATCATGAACGTCTCCGCTGTTGAGAAGGGCACTGGCAAG 8408 Query 196778 TCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGT 196837 | | ||||| || ||||| |||||||| || ||||| |||||||| || || || Sbjct 8407 ACCAACCAGATTACCATCACCAACGACAAGGGCCGTCTTTCCAAGGAGGACATCGAGCGC 8348 Query 196838 ATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 ||| || || || || |||| || ||| || || |||| Sbjct 8347 ATGCTTGCTGAGGCCGAGAAGTTCAAGGAGGAGGATGAGG 8308 >seq7016 Length=14425 Score = 205 bits (226), Expect = 1e-47 Identities = 185/233 (79%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || || ||||| || ||||| ||||| ||||| ||||| | Sbjct 10794 GTGGTATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAAT 10853 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | |||||||||||||| ||| ||||| | ||||||||||| ||||| || || || || | Sbjct 10854 CTTCAGACACAATCGACAACGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTG 10913 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | || ||||| | || ||||| || || ||||| || |||||| | ||||| |||||| Sbjct 10914 ACCAACAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGAAGAACCCTGTCTGATT 10973 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 |||| |||| |||||||| ||||| |||||||| || | ||||| || ||| Sbjct 10974 ACAATATTCAGAAGGAGTCGACTCTGCACCTTGTGCTCCGTCTTCGTGGCGGT 11026 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 ||||| || || |||||||||||||| ||||| || || ||||| ||| |||| | Sbjct 10139 ACTGGCAAGACCATCACCCTCGAGGTGGAGTCTAGCGATACCATCGACAACGTCAAGTCG 10198 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||| || || ||||| || || || || || || || || ||||||||||| || || Sbjct 10199 AAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAACAGCGTCTTATTTTTGCCGGCAAG 10258 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 || || || || || || || || | || |||||| | || |||||| |||||| ||| Sbjct 10259 CAACTCGAGGACGGTCGGACACTTTCCGACTACAACATCCAGAAGGAGAGTACTCTCCAC 10318 Query 172066 CTTGTTCTAAGGCTTCGGGGTGG 172088 || || || | || || ||||| Sbjct 10319 CTCGTGCTCCGCCTCCGTGGTGG 10341 >seq1340 Length=26111 Score = 143 bits (158), Expect = 4e-29 Identities = 169/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || ||||| || || || ||||||||||| ||||| |||||| Sbjct 14267 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 14208 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| ||||||| || || ||||| || || || || || ||| Sbjct 14207 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 14148 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || | || ||||| || || |||||||| || || | ||||| | || |||||| Sbjct 14147 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 14088 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTG 172090 | || |||||| || || ||||| || || | || || ||||||| Sbjct 14087 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGGTG 14039 >seq8771 Length=12952 Score = 136 bits (150), Expect = 5e-27 Identities = 327/492 (66%), Gaps = 6/492 (1%) Strand=Plus/Minus Query 195496 GCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATATAAAGGACTGGTC 195555 ||||||||| |||||||||||| |||| ||| | ||||| | ||||| ||| ||| | Sbjct 11395 GCGTCTTATCGGTCGCAAGTTTACGGACAAGGATGTCCAGCAAGATATCAAGCACTTCCC 11336 Query 195556 TTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGAATTTCACGGTGA 195615 || | ||||| | | | || ||||| | || || || | | ||||| Sbjct 11335 CTACAAGGTTGTGAACAAGGGAG--GA-AAGCCCGTTGTTTCGGTCGATGTCAAGGGTGA 11279 Query 195616 GAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGAC 195675 || || || || | ||||| || | ||| | ||| | ||| |||||||||||| Sbjct 11278 GACCAAGCAGTTCACCCCCGAGGAGGTCTCGGCCATGATCTTGGGCAAGATGAAGGAGGT 11219 Query 195676 TGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTT 195735 ||| || | | | |||| || | || | | || || || || || || || ||||| Sbjct 11218 TGCCGAGGCCTACTTGGGCAAGAAGGTTACCCACGCCGTCGTCACCGTTCCCGCGTACTT 11159 Query 195736 CAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCT 195795 || || || | ||||||||||||||||| | || |||||| ||||| ||| ||| Sbjct 11158 CAACGACAACCAGAGGCAGGCGACAAAGGACGCCGGTGTTATTGCCGGTCTCAACGTTCT 11099 Query 195796 TAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGA 195855 | | ||| | || || || || || || || | || || || |||||||||| | | Sbjct 11098 TCGTATTGTTAACGAGCCCACGGCTGCCGCTTTGGCGTACGGCCTGGACAAGACC---GG 11042 Query 195856 CGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCT 195915 ||| || || | | | | | || || |||||||| || || || || || || || Sbjct 11041 CGAGGAGAACCAGATCATCGTGTACGACCTGGGTGGTGGCACCTTCGACGTTTCCCTCCT 10982 Query 195916 CAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGG 195975 || || ||| | ||||| || ||| || || ||||| || || || ||||| Sbjct 10981 TTCGATCGACAACGGTGTTTTCGAGGTCCTGGCCACCGCCGGTGACACCCACCTTGGTGG 10922 Query 195976 TGAAGATTTCGA 195987 ||| |||||||| Sbjct 10921 TGAGGATTTCGA 10910 Score = 84.2 bits (92), Expect = 3e-11 Identities = 127/181 (70%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 195311 GATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTAGAGATTATC 195370 ||| | || || || ||||| ||||| ||||| ||| || | || |||||| || Sbjct 11656 GATCTGGGCACCACATACTCTTGTGTCGGTGTTATGCAGAAGGGCAAGGTTGAGATTCTC 11597 Query 195371 CCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAATGAACGT 195430 || |||||||||||||||| || || || ||||| ||||| || || | || | Sbjct 11596 GTCAACGACCAAGGAAACCGTATCACCCCCTCATACGTCGCCTTCACCGACGACGAGAGG 11537 Query 195431 CTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGTCTTTGAC 195490 || || ||||| ||||| || || ||| | || |||||| ||| || |||||||| Sbjct 11536 CTAGTAGGAGACGCCGCCAAGAACCAGGCCGCCTCGAACCCGTTCAGGACCATCTTTGAC 11477 Query 195491 G 195491 | Sbjct 11476 G 11476 >seq4410 Length=3584 Score = 131 bits (144), Expect = 2e-25 Identities = 503/779 (65%), Gaps = 17/779 (2%) Strand=Plus/Minus Query 195663 AGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTG 195722 |||||||||||| ||| || | || || || | || | | || ||| | |||| Sbjct 2725 AGATGAAGGAGATTGCCGAGGCCAAGATCGGCAAGAAGGTTGAGAAGGCCGTTATCACTG 2666 Query 195723 TACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGG 195782 | || || ||||||| || || || ||| | || |||||||| | ||| || | | Sbjct 2665 TCCCGGCCTACTTCAACGACAACCAGCGTCAGTCCACCAAGGACGCCGGTGCCATCTCTG 2606 Query 195783 GTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGG 195842 | || ||| || | || ||||| || || || || ||||| ||||| || ||||| | Sbjct 2605 GCCTTAACGTCCTCCGTATCATCAACGAGCCCACTGCTGCTGCCATTGCCTACGGTCTCG 2546 Query 195843 ACAAGAACAAG---GACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899 | |||| || | || || || |||||| |||||||| |||||||| | Sbjct 2545 GCTCCGGCAAGTCTGAGAAGGAGCGCAACGTCCTGATCTACGATCTCGGCGGTGGTACCT 2486 Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 | |||||||| || || || || | || ||| | ||| || |||||||||||||||| Sbjct 2485 TCGATGTCTCTCTCCTGAACATCCAGGGCGGTGTCTTCACCGTCAAGGCTACTGCTGGTG 2426 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTG-ATGAG 196018 | || || | ||||| | || ||||| | | | | | | | || | | || Sbjct 2425 ACACCCACTTGGGTGGCCAGGACTTCGACAC-CAACCTGTTGGACCACTGCAAGAAGGAC 2367 Query 196019 TTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGG 196078 |||| | |||| ||||| || | ||||| || | | || || ||||| || | Sbjct 2366 TTCCAGAGGAAGACCAAGAAGGACCTGTCTGGTGATGCCCGTGCCCTCCGTCGTCTCCGT 2307 Query 196079 ACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGG--CTCAAACAATGGTTGAGA 196136 || || || || |||||||| | || || || | |||| | || || | |||||| Sbjct 2306 ACCGCTTGCGAGCGTGCCAAGAGGACCCTGTC--CAACGGCACCCAGACCACTCTTGAGA 2249 Query 196137 TTGATTCGTTGTTTGACGGAATTGACTTCTATACAAC-TATTACCCGTGCACGTTTTGAA 196195 | || ||| |||||||||| |||||| | | | || ||| | || || || Sbjct 2248 TCGACTCGCTGTTTGACGGTGAGGACTTC-AGCCTGCAGATCACCAGGGCTAAGTTCGAG 2190 Query 196196 GAGTTAAACTCTGATTTGTTTAGGAAGTGTA---TGGAACCTGTTGAACAAGTACTTCGT 196252 ||| | ||| | || | ||| ||| ||| | || || ||| || || || Sbjct 2189 GAGCTCAAC-CAGACTGCTTT--CAAGGGTACCCTTGACCCCGTTACCCAGGTCCTCAAG 2133 Query 196253 GACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGT 196312 ||||| | || ||| | || || || || ||||| || |||||||| |||||| Sbjct 2132 GACGCTGGTGTCGACAAGGCCGCTGTCGACGAGATCGTCCTGGTCGGAGGATCTACCCGT 2073 Query 196313 ATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACG 196372 || || ||||| || || | || || || ||| || | | | || | Sbjct 2072 ATCCCCAAGATCCAGAAGCTTCTGTCCGACTACTTTGGAGGCAAGAAGCTCGAGAAGAGC 2013 Query 196373 ATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGG 196431 |||||||| || || || || ||||| ||||| ||||| ||||| | |||||| || || Sbjct 2012 ATCAACCCCGACGAGGCCGTCGCTTACGGTGCTGCCGTCCAGGCCGGTATTCTGTCCGG 1954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657789582855600