Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734685.1_202014-07-28] 8,855 sequences; 36,255,505 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq7016 163 3e-35 seq4577 158 1e-33 seq1340 104 2e-17 >seq7016 Length=14425 Score = 163 bits (180), Expect = 3e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || ||||| ||||| ||||| || || |||||||| ||| | | Sbjct 10799 ATGCAAATCTTCGTCAAGACGCTTACCGGCAAAACCATCACACTCGAAGTTGAATCTTCA 10858 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | || | || ||| |||||| |||||||| || || || || || || ||| Sbjct 10859 GACACAATCGACAACGTCAAATCAAAGATTCAAGACAAGGAGGGTATCCCGCCTGACCAA 10918 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||||||||| || || |||||||||||| |||| | |||| ||||| || Sbjct 10919 CAACGTTTGATCTTTGCGGGCAAGCAGCTGGAGGATGGAAGAACCCTGTCTGATTACAAT 10978 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| ||||| ||||| || ||| | ||| Sbjct 10979 ATTCAGAAGGAGTCGACTCTGCACCTTGTG 11008 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || | || || || || || ||| | || || || | | Sbjct 10571 ATGCAGATCTTCGTCAAGACTTTGACGGGCAAGACCATCACGTTGGAGGTCGAGTCTTCA 10630 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||||||||| || || || ||||| || ||| Sbjct 10631 GACACGATTGACAATGTTAAATCCAAGATCCAAGACAAGGAGGGTATTCCTCCGGACCAA 10690 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| || || || ||| |||||||| | | |||| || || ||| Sbjct 10691 CAGCGACTGATCTTCGCTGGAAAGCAGTTGGAGGATGGACGCACGCTGTCCGACTACAAC 10750 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||||||||| || || |||||||| |||| |||| || || Sbjct 10751 ATCCAAAAGGAATCTACTCTGCACTTGGTCCTGCGTCTGCGTGGTGG 10797 >seq4577 Length=8213 Score = 158 bits (174), Expect = 1e-33 Identities = 959/1524 (63%), Gaps = 56/1524 (4%) Strand=Plus/Plus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| || || ||||| | || || || |||||||||| || | |||||||| Sbjct 1594 ACCTGGAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAG 1653 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 | |||||||| || || || || | |||| | || || |||||| || || | | Sbjct 1654 CACTCGTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAG 1713 Query 138628 GAATTCCGTAAACCGTGAAGCTTGATTCGTT--CCTTGAGCGACGACCAGTCCCACAAAT 138685 || || | ||| || ||||||| ||| ||||||| | ||||||||| | | Sbjct 1714 CTGTTGCGGACACCATGTTGCTTGAT--GTTGGCCTTGAGAGCGTCCCAGTCCCAGAGGT 1771 Query 138686 CGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCC----AAACTTGCGGGACTG 138741 | ||| || ||||||||| |||||||| | |||||| |||| ||| Sbjct 1772 CTGAAGGCTTGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACA----GGAGAT 1827 Query 138742 CCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCA 138801 || ||||| | |||| ||| ||| | || | || | || || ||| Sbjct 1828 CCCTCGTATGTCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGAGGCAGTCAGAGCA 1887 Query 138802 CCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTAC 138861 | | ||| || || || |||| || ||||| || ||||| | |||| | Sbjct 1888 GCGTGGTAGATGGTCTCAAAGATCTTCTTGTTGAGATCACGAGCCTCAGGAGACTCGAAA 1947 Query 138862 GGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGA 138921 |||| ||||| ||| ||||| ||||| ||||| ||||||| |||| ||| | Sbjct 1948 GGCAGACGGAGTGCAAGGAAAGCGTCAGCCAGACCTTGGACGCCCAGACCGATAGGCCTG 2007 Query 138922 TGGCGCAGATTTGACGCTTTTGCG-GCTTC---GATAGGATAATAGTTTACATCGATGAT 138977 ||||||| || ||| ||||| || || || || || ||||| || |||||||| Sbjct 2008 TGGCGCATGTT----GCTGTTGCGTGCCTCCTGGACGGGGTAGTAGTTGACTTCGATGAT 2063 Query 138978 TTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTCAAAATCGTATGT 139037 ||||| | || || || || || | ||| | | | | ||||| |||||| Sbjct 2064 CTTGTTGAGGTTGCGAACAACGACTTGAGTGACCTCATGGAGTTTCTCAAAGTCGTATTC 2123 Query 139038 GCCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCA 139097 ||| || || |||||||| | | | || || || || | |||||| Sbjct 2124 ACCCTTGTGGTAGTCGACGAACTGGGGCA-------GAGCCAGG--GAAGCAAGGTTGCA 2174 Query 139098 CACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTT 139157 || || || ||||| ||| | ||| |||| ||| || | || | || | Sbjct 2175 TACAGCAACCTCGTCAGGGGCAGAGTACTCGATAATCTCCGTGCAGAGGTTGGAGCTGCG 2234 Query 139158 GATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATA 139217 || ||||| | || | || ||||| || ||||| || ||| ||||| ||||| | Sbjct 2235 AATGGTACCAAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTACAGCATGAA 2294 Query 139218 CGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAG--CTTGT 139275 ||| | ||||| || || | ||| | ||| | | | |||| || | |||| Sbjct 2295 CGGGTTACCAGTCTCAGTCTGAGCCTCCAGGATGGAATACCA-AAGTTTCTGGGCCTTG- 2352 Query 139276 AT----TTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATCG 139331 || ||| | | || || | |||| ||||| || || || | ||||| Sbjct 2353 ATCGTCTTGCGACCCTTAC----CGGCCTGCTCATACTTCTCATACAGAGCCTCGAACTC 2408 Query 139332 TTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGCC 139391 |||||||||| ||| | || | | |||| || || ||||| | | ||| |||| Sbjct 2409 TTCACCGTAGCAGTCCGCGAGGCCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCC 2468 Query 139392 GTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGCG 139451 ||| || |||||| ||||||||||||| || ||||| | ||||| | || || || Sbjct 2469 GTTTTTCTCAACGCGCTTCATGAACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACG 2528 Query 139452 CGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAGC 139511 || | || ||| || ||| | | || ||||| || || || || || Sbjct 2529 GGCACGAATCTCCTCCTTTCCGTGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGC 2588 Query 139512 GTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCGTTTG---CCACCTTGATCGAC 139568 |||||| || || || |||||||| | || || || ||| ||||| || ||||| Sbjct 2589 GTGCCACGGCTCAAGGTAGATGGCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGAC 2648 Query 139569 GTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGTT 139628 || || | | || ||||| || |||| ||| || | | ||| ||| || ||||| Sbjct 2649 GTAGCGAGCTGTGTTGTTGAACACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTT 2708 Query 139629 GGTGCTACGG----ATGGGA-CTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGATT 139683 ||| | ||| || ||| | || || |||| | ||| || |||| ||||| Sbjct 2709 GGTAC--CGGCGATATAGGAGCCAGTG---GCACGGATGCGATGGACGTTGAGACCGATA 2763 Query 139684 CCGCCGCCAAATTTGGATATTAAAACGCAA-TCGCGTAATGTCTCGTATATACCTCTTAT 139742 ||||| | | ||||| || | | ||| || | | || ||||| || || || Sbjct 2764 CCGCCAGCCATCTTGGAGATCATGGCACAAGTCTTG-AGGGTGTCGTAGATTCCCTCAAT 2822 Query 139743 GCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCCGGC 139802 ||||||||||| ||| ||||| ||||||||||| | || | | |||||||| Sbjct 2823 GCTGTCGTCCTTCATATCAACCAGGAAGCATGACGACAACTGAGCCTGCGGTGTGCCGGC 2882 Query 139803 TGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGTTTC 139862 || || || || ||||| ||||| | || | ||||| | | ||| ||||| Sbjct 2883 GTTGAAAAGCGTCGGGGAGGCGTGTGTGAAGAATTTGCTAGACATAAGGTTGTAGGTTTC 2942 Query 139863 GATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATGTTG 139922 |||| | | | |||| | || |||||| |||| || ||||| | ||| || || Sbjct 2943 GATGACTCGCTCAATGTTGTCACCCCAGATACCTACAGCAACACGCATGATCATGTGCTG 3002 Query 139923 GATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGGTCTTGTA 139982 || ||| | | | ||| | || || || ||| |||| || |||||| | Sbjct 3003 TGGCCTCTCGACAATCTTGCCATTGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAA 3062 Query 139983 GCCAAAGTACCTATAGTTGAAATC 140006 ||| || || ||||||||||| Sbjct 3063 GCCGAAATATTGGTAGTTGAAATC 3086 >seq1340 Length=26111 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || ||||| || || || || || | | | Sbjct 14267 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACTATCACCCTTGAGGTGGAGTCGAGC 14208 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 14207 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAG 14148 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || |||||||||||||| || ||||| ||||| || | | |||| || || ||| Sbjct 14147 CAGCGCTTGATCTTTGCCGGCAAGCAGCTTGAGGACGGCAGGACCCTGTCCGACTACAAC 14088 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 || || ||||| || || ||| | ||| |||| |||| || || || Sbjct 14087 ATCCAGAAGGAGAGCACCCTCCACCTCGTGCTGCGTCTGCGTGGTGGTGG 14038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449847801959400