Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734685.1_202014-07-28]
8,855 sequences; 36,255,505 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq4577 145 1e-28
seq4634 143 4e-28
seq1313 98.7 1e-14
>seq4577
Length=8213
Score = 145 bits (160), Expect = 1e-28
Identities = 187/258 (72%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984
|| ||||| || || |||||||| |||| | ||| ||||| ||||| ||| | ||
Sbjct 2897 CCGACGCTTTTCAACGCCGGCACACCGCAGGCTCAGTTGTCGTCATGCTTCCTGGTTGAT 2838
Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044
||||||| ||| || ||||| ||||| ||||| |||||| || || | ||||||
Sbjct 2837 ATGAAGGACGACAGCATTGAGGGAATCTACGACACCCTCAAGACTTGTGCCATGATCTCC 2778
Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104
||| ||| ||||| |||||| | || || | || ||| | ||| |||| |
Sbjct 2777 AAGATGGCTGGCGGTATCGGTCTCAACGTCCATCGCATCCGTGCCACTGGCTCCTATATC 2718
Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164
|| || ||||||||| || |||||| |||| |||||||| || || || ||| ||||
Sbjct 2717 GCCGGTACCAACGGCACCTCGAACGGCATTGTTCCCATGCTGCGTGTGTTCAACAACACA 2658
Query 260165 GCGCGCTACGTCGACCAG 260182
|| |||||||||||||||
Sbjct 2657 GCTCGCTACGTCGACCAG 2640
>seq4634
Length=7934
Score = 143 bits (158), Expect = 4e-28
Identities = 228/322 (71%), Gaps = 4/322 (1%)
Strand=Plus/Minus
Query 1456460 GACTTTGCCTGTCTGCTCTACACGATGCTCGTCAACAAGCCGTCGACCGACGTGCCCAAG 1456519
|||||||||||||| || | | || | || ||||| ||| | || || |||
Sbjct 493 GACTTTGCCTGTCTCCTGTTCTCGCTCCTGAACAACAGGCCCAACAAGGAGGTTGTGAAG 434
Query 1456520 CAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTG 1456579
|||| | ||||| || ||| |||| ||| |||||||| | | ||| || ||||
Sbjct 433 GAGATTGTTGTCGATGCTGTCAAGATTGAGCAAGAGTTTCTTACGGAGGCGTTGCCCTGC 374
Query 1456580 GCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACC 1456639
|| ||| | ||||||||||||| | || ||| ||||||||||| ||| ||||| |||
Sbjct 373 GCCCTCCTGGGCATGAACGCCAAC-CTGATGAAGCAGTACATTGAGTTT-GTCGCTGACA 316
Query 1456640 GCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGG 1456699
| || || | || || || || ||||| |||||| | ||||||| ||| |
Sbjct 315 GACTTCTTGTCGCCCTGGGAAACG-AGAAGGTCTACCGTGCCACCAACCCATTCGATTTT 257
Query 1456700 ATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTAC 1456758
|||||| ||||| |||| |||||||||||||| |||||| |||| ||||||||||
Sbjct 256 ATGGAGAACATCTCACTCGGCGGCAAGACCAACTTCTTCGAGAAACGCGTTGGCGAGTAC 197
Query 1456759 GCCAAGGCCGGCGTCACCGCCA 1456780
|| ||||| |||| ||||
Sbjct 196 CAAAAAGCCGGTGTCATGGCCA 175
Score = 111 bits (122), Expect = 2e-18
Identities = 135/183 (74%), Gaps = 1/183 (1%)
Strand=Plus/Minus
Query 1455885 TTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCT 1455944
|||||| ||| |||| || || || |||||| ||||||||||| |||||||||
Sbjct 996 TTCATCTCACACATCCTTGCATTCTT-CGCCGCTTCTGATGGCATCGTCAACGAGAACCT 938
Query 1455945 GGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCA 1456004
| | || || | || ||||| | || ||||| |||| || ||||| |||||
Sbjct 937 CGTTGAGCGATTCAGCGCCGAAGTCCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCA 878
Query 1456005 GATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAA 1456064
|||| || || ||||| ||||| || || |||||||||||||||||||| ||| ||||
Sbjct 877 GATCATGATGGAGAACATTCACTCCGAGACTTACTCGCTCCTGATCGACACGTACATCAA 818
Query 1456065 GGA 1456067
|||
Sbjct 817 GGA 815
Score = 93.3 bits (102), Expect = 6e-13
Identities = 117/157 (75%), Gaps = 9/157 (6%)
Strand=Plus/Minus
Query 1456123 AAAAAGGCCGACTGGGCGATGAAGTGGATCA---ACAAGGAGGGCCTCGACACTTTGCCG 1456179
|| |||||||||||||| ||| |||||||| ||||| || || || |||||||
Sbjct 691 AAGAAGGCCGACTGGGCTCTGAGGTGGATCACCGACAAGAAG----TCAAC-CTTTGCCA 637
Query 1456180 AGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCA 1456238
||| || ||| || || | ||||||||| ||||| ||| || ||| | |||
Sbjct 636 CGCGCCTGATCGCTTTCGCTGTCGTCGAGGGTATCTTCTTCAGCGGTGCTTTTGCCTCCA 577
Query 1456239 TCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|||| |||||||||||||| ||||| ||||| |||||
Sbjct 576 TCTTCTGGCTCAAGAAGCGTGGCCTGATGCCTGGTCT 540
>seq1313
Length=6374
Score = 98.7 bits (108), Expect = 1e-14
Identities = 80/97 (82%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 165768 GGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGCGAGATGGCGTCGGCGCTG 165827
||||| |||||||| |||||||||||||||||| | ||||||||| |||| || | ||
Sbjct 1918 GGCGCAGTCGGTGCCCGCACCACCGAGAGCCAGCTTCACCGCGAGCTGGCCTCTGGCCTA 1859
Query 165828 CCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCA 165864
|| | ||| | |||||||| ||| ||||||||||||
Sbjct 1858 TCGTTCCCCGTCGGCTTCAAGAACGGCACCGACGGCA 1822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7176957118974510
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |