Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734705.1_202014-07-28] 9,429 sequences; 36,235,577 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq8687 152 6e-32 >seq8687 Length=4984 Score = 152 bits (168), Expect = 6e-32 Identities = 444/675 (66%), Gaps = 28/675 (4%) Strand=Plus/Minus Query 115526 TGAACTGAATGGGTCT---CGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGA 115582 |||||||||| || || || || |||| | || ||||||||||| || ||||||| Sbjct 3705 TGAACTGAATCGG-CTGGGCGGCT--GCCTGCGTCCGCAGGTAGTACATGCCGGTCTTGA 3649 Query 115583 GCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTTTCCA 115642 | || |||||||| | | |||||| |||| | |||| | || || || Sbjct 3648 GACCAAGCTTCCAGCCGGTGAAATGCATCGAGGTGATCTTGCCCATGGTCGGGTCGCGCA 3589 Query 115643 TGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCAA 115702 || || ||| | ||||| || || |||||| || || || || ||||| | || Sbjct 3588 TGTGGATGTTGAGCGACTGGGACTGGTCAATGAAGGCACCACGGTCAGCGGCCATCTGAA 3529 Query 115703 TCACA-TCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGG 115761 || | | | | ||| ||||| ||||| ||||||| ||||| |||| || ||| Sbjct 3528 CGACGGTACGTTG-CGAGATCTCCCAAACAGTCTTGTAGAGCTTCTTGGTATCCTCAGGG 3470 Query 115762 ATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGA---TCCTTCATATCC 115818 || | || || ||||| ||||| || || | | |||| | | |||||| || Sbjct 3469 ATGCTGGCAATGTTCTGGATGGAGCCTCC---CTCGGCGATGATACGGTTCTTCATGTCG 3413 Query 115819 TTTGACCAGAGACCAATCTTCTTGAGATCCT----CCACGAGGTGCTTATTGACAACAAC 115874 | |||||| ||||||| || ||||||| | || ||| | ||||| || Sbjct 3412 TCTGACCACAGACCAAGCTCGACCAGATCCTTGAGCAACCAGGGG----TTGACTACCTG 3357 Query 115875 AAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTC 115934 ||||| || || || || | | || ||||||| || || |||||||||||||| Sbjct 3356 GAACTCGCCGGCAAGCACACGGCGTTGGTAAATGTTGGAAGTATAGGGCTCAAAGCACTC 3297 Query 115935 ATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 ||||| || | |||||| | ||| ||||| |||||||| || | ||| | |||||| Sbjct 3296 GTTGTTGCCAAGGATTTGTGACGTGCTAGCTGTAGGCATGGGGGCAACGAGCAAGCTGTT 3237 Query 115995 GCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTTGAGCTTT-- 116052 ||||| ||| | | ||| ||||||| ||||||||||| | ||| | | Sbjct 3236 GCGGACACCATGTTGCTTGATGTTGGCCTTGAGAGCGTCCCAGTCCCA---GAGGTCTGA 3180 Query 116053 -GTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAA 116111 | || | | |||||| || ||||||| || || || || | || |||||||| | Sbjct 3179 AGGCTTGACGTTCCACATGTCGTACTGGAGAATTCCCTGTGAAACAGGAGATCCCTCGTA 3120 Query 116112 TGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATA 116171 |||| ||||| |||| |||| || | | | | || || || ||||| || Sbjct 3119 TGTCGAGTATGGACCCTGCTCCTCTGCAAGCTTGCAAGAGGCAGTCAGAGCAGCGTGGTA 3060 Query 116172 CATTGTCTCAAAAAT 116186 || |||||||| || Sbjct 3059 GATGGTCTCAAAGAT 3045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613434890507640