Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734705.1_202014-07-28] 9,429 sequences; 36,235,577 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1780 174 1e-38 seq6364 150 2e-31 seq7613 109 5e-19 seq1296 84.2 2e-11 >seq1780 Length=15593 Score = 174 bits (192), Expect = 1e-38 Identities = 180/234 (77%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || ||||| | ||| || || || |||||||||||||| ||||| ||||| Sbjct 3561 ACCACCACCACGCAGACGCAGCACGAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTC 3620 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 ||| ||||| | |||| || |||||||||||||| || |||| |||||| ||||||| Sbjct 3621 GGACAGGGTCCTGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGG 3680 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGAC 41809 ||| | | |||||||||| ||| || ||| || | || | |||||||||||| Sbjct 3681 GGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCGCTCGAC 3738 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||||| | || || || || ||||| || ||||| ||||| ||||||||| Sbjct 3739 TCCACCTCAAGGGTGATAGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 3792 >seq6364 Length=14784 Score = 150 bits (166), Expect = 2e-31 Identities = 173/231 (75%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| ||| || ||||||||||| || ||||| |||||||| Sbjct 10543 GCCACCACGGAGACGAAGGACCAAATGGAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGA 10484 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||| || |||| || |||||||| || ||||| || ||||| |||||||||| || Sbjct 10483 AAGGGTCCGACCGTCCTCAAGCTGCTTTCCAGCGAAAATAAGGCGTTGTTGGTCCGGAGG 10424 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 || | |||||||||| ||| || ||| || | || | || ||| ||||| Sbjct 10423 AATACCCTCCTTGTCCTGGATCTTCGACTTTACATTGTCG--ATGGTATCGGAGGACTCG 10366 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||| || ||||| || || || || || || ||||||||||||||| Sbjct 10365 ACCTCCAAGGTAATCGTCTTGCCAGTGAGGGTTTTGACGAAAATCTGCATG 10315 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| ||||| || ||||| || ||||| |||||||| Sbjct 10770 CCACCACGCAGACGCAGGACCAAGTGCAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 10711 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || | |||||| || ||||| ||||| ||||||||||||| ||| Sbjct 10710 AGCGTGCGTCCATCCTCCAACTGCTTTCCAGCGAAGATCAGTCGCTGTTGGTCCGGAGGA 10651 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||| | || | || | || ||| | | | ||||| ||||| || Sbjct 10650 ATACCCTCCTTGT-CTTGGATCTTGGATTTAACATTGTCAATCGTGTCTGAAGACTCGAC 10592 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||| ||| || || || ||||||| ||||| ||||| ||||||||| Sbjct 10591 CTCCAACGTGATGGTCTTGCCCGTCAAAGTCTTGACGAAGATCTGCATG 10543 Score = 120 bits (132), Expect = 3e-22 Identities = 151/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | ||| || || || || ||||||||||| ||||| |||||||| Sbjct 10315 GCCACCACGGAGGCGGAGCACGAGGTGGAGAGTACTCTCCTTCTGGATGTTGTAGTCGGA 10256 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || |||| ||||| ||||||||||| || || || ||||||||||||| || Sbjct 10255 AAGTGTCCGACCGTCCTCGAGTTGCTTGCCGGCAAAAATAAGACGCTGTTGGTCCGGAGG 10196 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || ||| ||| | | | || ||||| ||||||| Sbjct 10195 GATACCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATGGTATCGCTAGACTCCA 10137 Query 41814 CCTCCACCGTTATCGTTTTACCCGT 41838 |||| | || || || || || || Sbjct 10136 CCTCGAGGGTGATGGTCTTGCCAGT 10112 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || ||||| | ||| || ||||| || |||||||||||| || || || || Sbjct 10998 CCGCCACGAAGACGGAGCACAAGGTGCAGAGTCGACTCCTTCTGAATATTGTAATCAGAC 10939 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| | | || || ||||||||||| || || |||| || |||||||| | || Sbjct 10938 AGGGTTCTTCCATCCTCCAGCTGCTTGCCCGCAAAGATCAAACGTTGTTGGTCAGGCGGG 10879 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||| | ||| | |||| || ||| | | | ||||| || || || Sbjct 10878 ATACCCTCCTTGT-CTTGAATCTTTGATTTGACGTTGTCGATTGTGTCTGAAGATTCAAC 10820 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||| || || |||||||| ||||| || ||||| Sbjct 10819 TTCGAGTGTGATGGTTTTGCCGGTAAGCGTCTTGACGAAGATTTGCAT 10772 >seq7613 Length=24269 Score = 109 bits (120), Expect = 5e-19 Identities = 137/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| ||||||||||| || || |||| || | ||||||||| || || | Sbjct 18401 CCTTCTGGATGTTGTAGTCGGAGAGAGTACGGCCGTCCTCCAACTGCTTGCCAGCAAAGA 18460 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGAC 41791 | || ||||||||||| | ||||| | |||||||||| ||| | || | |||| || Sbjct 18461 TAAGACGCTGTTGGTCAGGGGGAATTCCCTCCTTGTCC-TGAATCTTGGACTTC-ACATT 18518 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | | ||||| ||||| ||||||| || || || || || ||||| ||||| || Sbjct 18519 GTCGATCGTGTCCGAGGACTCGACCTCCAAGGTGATGGTCTTGCCAGTCAGAGTCTTCAC 18578 Query 41851 GAA 41853 ||| Sbjct 18579 GAA 18581 >seq1296 Length=5628 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 85799 TCGTATCGCACCTCGTTCCGGCCTCGCCAGCAAGCACGGTATCGACGTGGGCGCCGGGGT 85858 |||||||||||| || ||||| ||||| ||| ||| |||||| |||||||| || Sbjct 2117 TCGTATCGCACCCCGCTCCGGTCTCGCGGCCAAACACTTCATCGACACCGGCGCCGGCGT 2058 Query 85859 CATCGACGCCGACTACCGCGGAAACGTCATCATCGTACTCTTCAACCACGGCGA 85912 ||| || |||||||||||||| | |||| || | | |||||||||| ||| Sbjct 2057 CATTGATGCCGACTACCGCGGTCAGGTCAAGGTCCTGTTGTTCAACCACGCCGA 2004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462249511694800