Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734735.1_202014-07-28]
9,152 sequences; 36,003,007 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq5054 122 1e-22
seq5055 109 6e-19
>seq5054
Length=1418
Score = 122 bits (134), Expect = 1e-22
Identities = 124/162 (77%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 145690 TCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCG 145749
|| ||||||| | ||||||||| || || |||| |||||| | | ||||||| |
Sbjct 1130 TCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCACT 1189
Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809
|| |||||| | || | ||||| |||||||| | ||||||||| ||||||||||||
Sbjct 1190 AGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGGC 1249
Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851
|| || || |||||||| | || |||||||| |||||||||
Sbjct 1250 ACGCCTAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCAG 1291
>seq5055
Length=16026
Score = 109 bits (120), Expect = 6e-19
Identities = 184/262 (70%), Gaps = 6/262 (2%)
Strand=Plus/Plus
Query 146008 CCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGG 146067
||||| ||| ||| |||| | | |||| ||| |||| || ||||| | ||| |||
Sbjct 1 CCCTGGCCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCGGCGCCAAAGTGGCGCCATTGG 60
Query 146068 AACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGC-CCCAGCCCGGCCCGGGCGAG 146126
|| ||||||||||| |||||||| || ||| | |||| | | ||| |||| | | ||
Sbjct 61 AAGCCGTAGACGGGGCCCAGGTCGCCCACCTCGCGGTGCTGCAATCCCAGCCC-GTCCAG 119
Query 146127 GAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTG 146184
||| || ||| |||||| |||||||||||||||| || | |||| || | ||
Sbjct 120 GAACTCACGGCTGCCGTTGCCGTCCCAGATCTTGACCCCGGCGTCGCTCAGGG--GCTTC 177
Query 146185 GAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACC 146244
| ||| | ||| | |||||| |||||||| || || ||| | |||||||
Sbjct 178 GCCGACGTCGCGCCCGACACGAACCACAGCAGCTCGAGGATCACGGCCCGCGAGAAGACG 237
Query 146245 CTCTTGGTGGTCAGCAGGGGGA 146266
| ||| || |||||||| ||||
Sbjct 238 CGCTTCGTCGTCAGCAGAGGGA 259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590009295214080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |