Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734735.1_202014-07-28]
9,152 sequences; 36,003,007 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq6174 185 1e-41
>seq6174
Length=4953
Score = 185 bits (204), Expect = 1e-41
Identities = 464/702 (66%), Gaps = 20/702 (3%)
Strand=Plus/Plus
Query 66012 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 66071
||||| || || | ||| |||||||| | ||| || |||| | || || || |||||
Sbjct 2421 CCAGGGCACTCGTTCGGGCACATCAAGGTCCAGTCGCCGTTTTTCTCAACGCGCTTCATG 2480
Query 66072 AAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCT 66131
|| |||||||| ||||||||||| | || | || | || | | ||||| |||||
Sbjct 2481 AACAGATCAGGGATCCAAAGAGCGAGGAACAGGTCACGGGCACGAATCTCCTCCTTTCCG 2540
Query 66132 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTATATG 66191
||||| | || ||||||||| | | | ||| |||||||| || | ||| |||
Sbjct 2541 TGGTTCTTCCTTAGGTCGAGGAACTCGAAGACATCTGCGTGCCACGGCTCAAGGTAGATG 2600
Query 66192 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 66251
|| | | || || || ||||| || ||||| || | ||| | ||| ||||| || |
Sbjct 2601 GCAAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGAGCTGTGTTGTTGAAC 2660
Query 66252 ACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCA 66311
|| | || ||| |||| ||| || || || || || ||||| |||| ||||||| |||
Sbjct 2661 ACACGCAGCATGGGAACAATGCCGTTCGAGGTGCCGTTGGTACCGGCGATATAGGAGCCA 2720
Query 66312 CTTGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 66369
| ||||| || | | ||| ||||| || || || ||||| || ||||| | |
Sbjct 2721 GTGGCACGGATGCGATGGACGTTG--AGACCGATACCGCCAGCCATCTTGGAGATCATGG 2778
Query 66370 CGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAA 66429
| || || | || || ||||| ||||| || || || ||| |||| | || || |
Sbjct 2779 CACAAGTCTTGAGGGTGTCGTAGATTCCCTCAATGCTGTCGTCCTTCATATCAACCAGGA 2838
Query 66430 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 66489
| || |||| || | || || || || || | || || || ||||| |
Sbjct 2839 AGCATGACGACAACTGAGCCTGCGGTGTGCCGGCGTTGAAAAGCGTCGGGGAGGCGTGTG 2898
Query 66490 TAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT------ATCCC 66543
| || |||| ||| | || ||||| || || || || || || | |||
Sbjct 2899 TGAAGAATTTGCTAGACATAAGGTTGTAGGTTTCGATGACTCGCTCAATGTTGTCACCCC 2958
Query 66544 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 66603
| || ||||| || |||||||| | ||||||||| || || || || ||||||
Sbjct 2959 A------GATACCTACAGCAACACGCATGATCATGTGCTGTGGCCTCTCGACAATCTTGC 3012
Query 66604 TGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 66661
|| | ||||| | ||| || | || | ||| || || || ||||| | ||| |||
Sbjct 3013 CATTGAGCTTCAATAGGTAAGACCTCTCGAGAGTCTTGAAGCCGAAATATTGGTAGTTGA 3072
Query 66662 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 66703
|| || || ||||| | |||| | |||| ||| | |||||
Sbjct 3073 AA--TCACGGTCGTAGACAATAGCTGAGTCGAGATCCTCCTT 3112
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658097505031680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |