Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734735.1_202014-07-28] 9,152 sequences; 36,003,007 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq5054 107 2e-18 seq5055 86.0 5e-12 >seq5054 Length=1418 Score = 107 bits (118), Expect = 2e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 29748 CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGG 29807 |||||| ||| || ||| || || || ||||| | ||| ||||| ||| || | Sbjct 1069 CCTGTTGATCTCGAGCTCGGGGAACGGCCTCGGCTCGCGCTCCAGCTGCGTCCGGAGTGC 1128 Query 29808 TTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTC 29867 || ||||| || |||||||||||| || |||| | ||| | | || || | Sbjct 1129 GTCGACGTGGTCGGCGTAGACGTGAGCATCGCCCATGACGTGCGTCAGCGACCCGGGCAC 1188 Query 29868 TAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGG 29927 ||| || ||| | | || ||||||| ||| || || | ||||||||| ||||| ||||| Sbjct 1189 TAGACCCGTGGCACGCGCAATCATGTGCGTCAGCAGTGCGTAGCTGGCAATGTTGAAGGG 1248 Query 29928 TACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969 || || || |||||||| | |||| |||||||||||| || Sbjct 1249 CACGCCTAGGCCCATGTCGCAGGACCGCTGGTAGAGCTGGCA 1290 >seq5055 Length=16026 Score = 86.0 bits (94), Expect = 5e-12 Identities = 173/253 (68%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 30133 CCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCG 30192 |||| ||||||||| ||| ||||| || || || || || | ||| ||||| ||| Sbjct 7 CCCGTGTAGTCTGCGTGGCAGTCGGTGTATTCGGCGCCAAAGTGGCGCCATTGGAAGCCG 66 Query 30193 TACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCT 30252 || || || |||||||| ||| | || | ||||| || ||| | ||||| || || Sbjct 67 TAGACGGGGCCCAGGTCGCCCACCTCGCGGTGCTGCAATCCCAGCCCGTCCAGGAACTCA 126 Query 30253 CTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTTCTCGGAGAGCTCTTTGGAGTTTG 30310 | | |||||| ||||||||||||| ||||| | || | || | ||| | | | Sbjct 127 CGGCTGCCGTTGCCGTCCCAGATCTTGACCCCGGCGTCGCTCAG-GGGCTTCGCCG-ACG 184 Query 30311 TGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGG 30370 | | || ||||||||||||||||| | |||||| | | ||||| | ||| | Sbjct 185 TCGCGCCCGACACGAACCACAGCAGCTCGAGGATCACGGCCCGCGAGAAGACGCGCTTCG 244 Query 30371 TCGTGAGGAGGGG 30383 |||| || || || Sbjct 245 TCGTCAGCAGAGG 257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408572022792896